Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   N2A93_RS04300 Genome accession   NZ_CP104046
Coordinates   817995..819764 (+) Length   589 a.a.
NCBI ID   WP_003106602.1    Uniprot ID   -
Organism   Streptococcus parauberis strain KSP14     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 812995..824764
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N2A93_RS04285 (N2A93_04285) - 813802..815679 (+) 1878 WP_003106601.1 ABC-F family ATP-binding cassette domain-containing protein -
  N2A93_RS04290 (N2A93_04290) - 815683..816156 (+) 474 WP_003105038.1 GNAT family N-acetyltransferase -
  N2A93_RS04295 (N2A93_04295) rcrP 816259..817995 (+) 1737 WP_003102488.1 ABC transporter ATP-binding protein Regulator
  N2A93_RS04300 (N2A93_04300) rcrQ 817995..819764 (+) 1770 WP_003106602.1 ABC transporter ATP-binding protein Regulator
  N2A93_RS04305 (N2A93_04305) gdhA 819895..821241 (+) 1347 WP_003106603.1 NADP-specific glutamate dehydrogenase -
  N2A93_RS04310 (N2A93_04310) - 821307..821717 (+) 411 WP_003106604.1 peptide deformylase -
  N2A93_RS04315 (N2A93_04315) - 821755..821940 (-) 186 WP_003102863.1 hypothetical protein -
  N2A93_RS04320 (N2A93_04320) - 821946..822974 (+) 1029 Protein_800 ABC transporter ATP-binding protein -
  N2A93_RS04325 (N2A93_04325) mvk 823137..824015 (+) 879 WP_003106606.1 mevalonate kinase -

Sequence

Protein


Download         Length: 589 a.a.        Molecular weight: 66110.52 Da        Isoelectric Point: 5.9269

>NTDB_id=626518 N2A93_RS04300 WP_003106602.1 817995..819764(+) (rcrQ) [Streptococcus parauberis strain KSP14]
MTEKHVFKRIWTYLRKYKTSLISAVLLKVVSALMSSLEPFVLGLAITEISNNLIEMAKGVEGAGINKSYIAFILFLYFIR
AVFFEIGSYGSNYFMTKAVQSGIKDLRQDLSHKINKIPVSYFDKHQFGDMLGRFTSDVETVSNALQQAFLQIVNAFLTIT
FAVIMALYINAPLASILIISVPLIYFSSQFVLKKSQPYFKEQAKVLGDMNGFVQENLSGFNILKLYGREDRSEEDFHAIT
DRLQEVGFKASFLSGIMMPVLHFISDSVYMIIALLAGLQVLAGKLAIGNMQAFVQYIWQISQPIQTITQLAPVLQSSKSS
LERIFTVLDETEDLSKENVSLTVPLTGQVSFNQVDFSYNDSKSLIKDFTLDVEPGEMIAIVGPTGAGKTTLINLLMRFYD
VKSGSITVDGMDIREISRQAYRQQFGMVLQDAWLFEGTIQENLQFGNLSATEDDIIQAAETANVDHFISTLPGGYQMMMN
QESSNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMKRLMKGRTSFVIAHRLSTIQEADKILVLKDGQ
IIEQGSHYNLLEARGFYYDLYYSQFKTSN

Nucleotide


Download         Length: 1770 bp        

>NTDB_id=626518 N2A93_RS04300 WP_003106602.1 817995..819764(+) (rcrQ) [Streptococcus parauberis strain KSP14]
ATGACAGAAAAACATGTATTCAAAAGAATCTGGACTTATCTTAGGAAATATAAAACATCATTAATTTCAGCTGTCCTTTT
AAAAGTCGTTAGTGCCTTAATGAGTTCTTTAGAGCCTTTTGTCCTTGGTCTTGCTATTACAGAGATATCAAATAACCTCA
TTGAGATGGCTAAAGGAGTAGAAGGGGCAGGAATTAATAAATCTTATATTGCTTTTATCCTCTTCTTATATTTTATCCGT
GCTGTCTTTTTTGAAATCGGTTCATATGGCTCTAACTATTTTATGACCAAGGCTGTACAATCAGGGATAAAAGATTTACG
TCAGGACTTAAGTCATAAAATTAATAAAATTCCAGTTTCTTATTTTGATAAGCATCAATTTGGAGATATGTTGGGACGCT
TTACATCCGACGTAGAAACTGTCTCAAATGCTTTACAACAAGCCTTTTTGCAAATTGTTAATGCCTTCTTAACGATTACT
TTTGCAGTTATTATGGCCCTTTATATTAATGCGCCTTTGGCTTCAATTTTGATTATTAGCGTTCCTTTAATCTATTTTTC
TTCTCAATTTGTCTTGAAAAAATCACAACCCTACTTTAAGGAGCAAGCTAAAGTATTAGGGGATATGAATGGTTTTGTTC
AAGAGAATTTAAGCGGATTTAATATTCTTAAATTATATGGTCGCGAGGATCGATCTGAGGAAGACTTTCATGCCATCACA
GATCGCCTTCAAGAAGTTGGGTTCAAAGCAAGTTTCTTATCTGGGATTATGATGCCCGTATTGCATTTTATCTCTGACTC
GGTCTATATGATTATAGCCCTATTAGCCGGACTCCAAGTTTTGGCAGGAAAACTAGCTATTGGAAATATGCAGGCTTTTG
TTCAGTATATCTGGCAAATTAGTCAGCCGATTCAAACAATTACCCAATTAGCTCCCGTTCTTCAAAGTTCTAAATCATCA
CTCGAACGGATTTTTACGGTTCTTGATGAAACTGAAGATCTTTCTAAGGAAAATGTCTCACTAACAGTGCCCTTGACAGG
ACAAGTATCCTTTAATCAAGTTGACTTTTCCTATAATGATTCTAAGTCACTGATTAAAGATTTTACCTTAGACGTTGAAC
CTGGTGAAATGATTGCTATCGTTGGTCCGACTGGCGCTGGTAAAACAACTTTGATAAATCTTCTTATGCGTTTCTATGAT
GTTAAGAGTGGCTCAATTACTGTAGATGGGATGGATATTAGAGAGATTTCTAGGCAAGCCTATCGTCAGCAATTCGGGAT
GGTTTTACAGGATGCTTGGTTGTTTGAAGGGACTATTCAAGAGAATCTTCAATTTGGGAATTTGTCGGCGACAGAAGATG
ATATCATTCAAGCCGCTGAGACGGCCAACGTTGATCACTTTATTAGTACCTTGCCTGGCGGTTATCAGATGATGATGAAC
CAGGAATCAAGCAATATTTCTCTGGGGCAAAAACAACTCTTAACTATTGCGCGTGCGCTGTTAGCAGATCCGAAAATACT
GATTTTGGACGAGGCTACCTCATCAGTCGATACCCGTTTAGAATTATTAATTCAAAAAGCGATGAAACGCTTGATGAAAG
GTAGAACAAGTTTTGTGATTGCTCACCGTTTATCAACGATTCAAGAAGCAGATAAGATACTAGTTCTAAAAGATGGCCAA
ATTATTGAACAAGGAAGTCATTACAATCTCCTAGAGGCTCGTGGATTTTATTATGATCTCTATTATAGCCAGTTCAAAAC
ATCCAATTGA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(22-303)

ABC transporter (ABC_tran)

(366-514)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

42.517

99.83

0.424