Detailed information NTG0062514

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: N288_RS17380
• Genome accession: NC_022524
• Coordinates: 3422920..3425340 (-)
• Length: 806 a.a.
• NCBI ID: WP_009796217.1
• Uniprot ID: U5LG21
• Organism: Bacillus infantis NRRL B-14911
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3417920..3430340

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N288_RS17365 (N288_18740)	-	3420330..3421400 (-)	1071	WP_022544218.1	AI-2E family transporter	-
N288_RS24840 (N288_18745)	-	3421474..3421608 (-)	135	WP_022544219.1	YrzQ family protein	-
N288_RS17370 (N288_18750)	-	3421626..3421817 (-)	192	WP_009796221.1	hypothetical protein	-
N288_RS17375 (N288_18755)	-	3421873..3422346 (-)	474	WP_022544220.1	PRC-barrel domain-containing protein	-
N288_RS25430 (N288_18760)	-	3422697..3422858 (-)	162	WP_009796218.1	hypothetical protein	-
N288_RS17380 (N288_18765)	recD2	3422920..3425340 (-)	2421	WP_009796217.1	ATP-dependent RecD-like DNA helicase	Machinery gene
N288_RS17385 (N288_18770)	-	3425384..3426034 (-)	651	WP_009796216.1	tetratricopeptide repeat protein	-
N288_RS17390 (N288_18775)	mnmA	3426230..3427342 (-)	1113	WP_009796215.1	tRNA 2-thiouridine(34) synthase MnmA	-
N288_RS17395 (N288_18780)	-	3427433..3428575 (-)	1143	WP_022544221.1	cysteine desulfurase family protein	-
N288_RS17400 (N288_18785)	cymR	3428670..3429089 (-)	420	WP_009796213.1	cysteine metabolism transcriptional regulator CymR	-
N288_RS17405 (N288_18790)	-	3429086..3429778 (-)	693	WP_009796212.1	YczE/YyaS/YitT family protein	-

Sequence

Protein

• Length: 806 a.a.
• Molecular weight: 90678.47 Da
• Isoelectric Point: 4.9107

>NTDB_id=62514 N288_RS17380 WP_009796217.1 3422920..3425340(-) (recD2) [Bacillus infantis NRRL B-14911]
MEKQDSLDLFAEQGKFIKGKHLVTIFHNESNLYTVLRIRVEETNHEYDDKEAVITGYFPKVHDHESYIFYGEFKEHPKFG
LQFLANHFRKDIPQTKQGVVGYLSGELFKGIGKKTAESIVDKLGENAISRILNQPSLLDEIPKLPSEKAKLLYDTLMEHQ
GLEQAMIALNQYGFGPQLSMKIYQMYKDETVQLLQTNPYKLVEDIEGIGFGRADELGYQLGISGSHPDRIKAACLYILET
ESMQNGNVYVHARTLLEKARSLLEENKRDQIEYSSISQEVIKLEEEGKIMAEDKRIYLPSLYFAEKGLVTSIKRLLQQTE
YDEQFPESEFLLALGSLEERIGVQYAPSQKEAIQTALMSPMLILTGGPGTGKTTVIKGIVELYAELHGCSLEPKDYKKEE
PFPFLLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGTEGFDHHEDNPLEGKILIVDETSMVDIWLANKLFKALPENIQVI
LVGDEDQLPSVGPGQVLKDLLLSEKVPTVRLTDIYRQAEGSSIIELAHEIKKGGLPDDIAVQQADRSFLKCSPAQIADVV
EKVVLNARKKGYRSRDIQVLAPMYRGPAGIDNLNKILQEILNPNPDGTRKELSFGDVKYRVGDKVLQLVNQPENNVFNGD
MGEIVSVFYAKENTEKQDMIVVSFDGNEATYTRQDLSQITLAYCCSVHKSQGSEFPIVIMPIVRSYYRMLRRNLIYTAIT
RSRQFLILCGEESALRSGVQRAEEQARLTSLTKRLQDALGEAPEQTGQEEAGEEAEEVPYEVKLMNADPMIGMGSITPYD
FLEEKA

Nucleotide

• Length: 2421 bp

>NTDB_id=62514 N288_RS17380 WP_009796217.1 3422920..3425340(-) (recD2) [Bacillus infantis NRRL B-14911]
ATGGAGAAGCAGGATTCTCTGGATCTTTTTGCCGAACAGGGCAAATTCATCAAAGGGAAGCATCTTGTGACTATTTTTCA
TAATGAATCAAATCTATATACAGTGCTCCGGATCCGGGTGGAAGAGACGAATCATGAATATGACGACAAGGAAGCTGTCA
TCACAGGCTATTTCCCGAAGGTGCATGACCATGAATCGTATATTTTCTATGGGGAATTCAAGGAGCACCCGAAATTCGGC
CTTCAATTCCTGGCGAATCATTTCCGAAAGGATATCCCCCAGACCAAGCAGGGCGTAGTAGGCTATCTTTCCGGCGAGCT
TTTTAAAGGCATCGGGAAAAAGACGGCAGAATCTATCGTAGATAAACTTGGGGAGAATGCGATTTCCAGAATCCTCAACC
AGCCCTCCCTCCTGGACGAGATCCCGAAACTACCTTCTGAAAAAGCAAAGCTCCTTTACGACACACTTATGGAGCATCAG
GGTCTGGAACAGGCAATGATTGCACTGAATCAATATGGCTTCGGCCCCCAGCTGAGCATGAAGATTTATCAGATGTACAA
GGATGAGACGGTCCAGCTTCTGCAGACCAATCCATACAAGCTGGTTGAGGATATTGAAGGCATCGGCTTCGGCAGGGCGG
ATGAGCTTGGCTACCAGCTTGGCATTTCAGGAAGCCATCCTGACCGCATCAAGGCGGCATGCCTGTATATCCTGGAAACA
GAAAGCATGCAGAACGGAAATGTTTATGTGCATGCCCGCACCCTCCTGGAAAAAGCCAGGTCGCTTCTTGAGGAAAATAA
AAGAGATCAGATAGAATACAGCTCCATCTCCCAGGAAGTTATCAAGCTCGAAGAAGAAGGCAAGATCATGGCAGAAGATA
AACGGATTTATCTGCCCTCACTTTATTTTGCTGAAAAGGGGCTTGTAACGAGCATCAAGCGGCTGCTGCAGCAGACCGAG
TATGATGAACAATTCCCTGAGTCGGAGTTCCTGCTTGCCCTTGGCAGCCTTGAGGAAAGGATAGGTGTGCAGTACGCCCC
TTCGCAAAAAGAAGCAATCCAGACCGCTCTGATGAGTCCCATGCTTATCCTGACGGGGGGACCGGGAACGGGAAAGACAA
CAGTCATCAAAGGTATAGTCGAACTGTACGCTGAGCTGCATGGCTGCTCACTGGAACCGAAGGATTATAAAAAGGAAGAG
CCTTTCCCGTTCCTCCTGGCCGCCCCGACAGGAAGGGCCGCCAAGCGGATGTCCGAATCGACCGGCCTTCCTGCTGTAAC
GATCCACAGGCTGCTCGGCTGGAATGGAACGGAAGGCTTTGACCACCATGAAGACAATCCGCTGGAAGGGAAAATCCTGA
TAGTCGATGAAACCTCCATGGTAGACATCTGGCTGGCGAACAAGCTGTTCAAGGCTTTGCCGGAAAACATCCAGGTCATC
CTGGTAGGAGATGAAGACCAGTTGCCTTCAGTCGGACCCGGCCAGGTGCTGAAGGATCTGCTTCTTTCAGAAAAAGTGCC
CACTGTCAGGCTGACAGATATTTACCGGCAGGCAGAAGGCTCATCCATCATTGAGCTGGCGCACGAAATCAAAAAAGGCG
GTCTTCCTGATGATATCGCGGTCCAGCAGGCCGACAGATCATTCCTTAAGTGCAGCCCTGCCCAGATTGCCGATGTGGTT
GAAAAGGTAGTCCTGAATGCCAGGAAAAAAGGCTACAGGTCCAGGGATATTCAGGTTCTCGCTCCCATGTACAGGGGGCC
GGCAGGAATTGATAATCTGAATAAGATCCTTCAGGAAATTTTAAACCCCAATCCTGATGGCACCAGGAAGGAGCTATCTT
TCGGTGATGTGAAATACAGGGTGGGCGATAAGGTCCTACAGCTGGTCAACCAGCCGGAAAATAACGTATTTAACGGCGAT
ATGGGCGAAATTGTATCTGTCTTCTATGCAAAGGAAAATACCGAAAAGCAGGATATGATCGTTGTTTCTTTTGATGGTAA
CGAAGCAACCTATACAAGGCAGGACCTCAGCCAGATTACGCTTGCCTACTGCTGCTCTGTCCATAAATCACAGGGAAGTG
AGTTTCCGATTGTCATTATGCCGATCGTCCGGAGCTATTACCGCATGCTCAGAAGGAACCTGATTTATACAGCCATTACG
AGAAGCAGACAGTTTCTCATCCTTTGCGGTGAAGAATCAGCGCTGAGATCCGGGGTGCAGAGGGCGGAAGAGCAGGCAAG
GCTGACTTCCCTGACAAAACGGCTTCAGGATGCACTTGGGGAAGCTCCAGAGCAGACAGGCCAGGAAGAAGCAGGCGAAG
AAGCCGAAGAGGTTCCATACGAAGTAAAGCTCATGAATGCAGATCCCATGATAGGCATGGGATCCATCACTCCTTATGAC
TTTTTGGAAGAGAAAGCATAA

Domains

Predicted by InterproScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (682-729)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-249)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-664)

• AAA domain (AAA_30) (345-550)

3D structure

• AlphaFold DB: U5LG21

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	61.768	99.628	0.615