Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   FNL60_RS05375 Genome accession   NZ_AP019720
Coordinates   1037154..1038899 (+) Length   581 a.a.
NCBI ID   WP_002279944.1    Uniprot ID   -
Organism   Streptococcus mutans strain NBRC 13955     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1032154..1043899
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FNL60_RS05355 (SM3g_09820) glyA 1032562..1033824 (+) 1263 WP_002279946.1 serine hydroxymethyltransferase -
  FNL60_RS05360 (SM3g_09830) - 1033821..1034798 (+) 978 WP_002264268.1 nucleoid-associated protein -
  FNL60_RS05365 (SM3g_09840) - 1034800..1035414 (+) 615 WP_002262260.1 lysozyme family protein -
  FNL60_RS05370 (SM3g_09850) - 1035424..1037157 (+) 1734 WP_002279945.1 ABC transporter ATP-binding protein -
  FNL60_RS05375 (SM3g_09860) rcrQ 1037154..1038899 (+) 1746 WP_002279944.1 ABC transporter ATP-binding protein Regulator
  FNL60_RS05380 (SM3g_09870) - 1039030..1040745 (-) 1716 WP_002264266.1 phospho-sugar mutase -
  FNL60_RS05385 (SM3g_09880) - 1040840..1041412 (-) 573 WP_002262264.1 ECF transporter S component -
  FNL60_RS05390 (SM3g_09890) coaC 1041487..1042026 (-) 540 WP_002262265.1 phosphopantothenoylcysteine decarboxylase -
  FNL60_RS05395 (SM3g_09900) - 1042019..1042705 (-) 687 WP_002267677.1 phosphopantothenate--cysteine ligase -

Sequence

Protein


Download         Length: 581 a.a.        Molecular weight: 65272.96 Da        Isoelectric Point: 9.5038

>NTDB_id=62487 FNL60_RS05375 WP_002279944.1 1037154..1038899(+) (rcrQ) [Streptococcus mutans strain NBRC 13955]
MKARNNKNTLKRLTADFLKQRILVFLALLGTLIQVSLTVYLPVLIGQAVDAVLAKNVQKILPTILISMILVVAFNTIIQW
INPLTYNRLVFTYSQKLRQNIIEKLYRLPLSYLDKHSSGDLVSRITTDVEQLSNGLLMVFNQFFVGILTILLTIITMAKL
DFFMMILVLVLTPLSLFVARFIAQKSYHLYQRQTRARGAFTQHIEESLRQESLIQSFNAQDQFIHTFDHLNSKYAKYSQG
AIFYSSTVNPATRFINALIYALLAGIGALRIMNGNFTVGQLTTFLNYVTQYTKPFNDISAVLSELQSALACAERLYMILD
EKDAKDDGKKELVSESVKGAIAFDKISFGYDEKQTLIKNLSVNIPQGSKVAIVGPTGAGKSTLINLLMRFYDLREGQILL
DGQAITDYSKASYRQQIGMVLQETWLKTATVLENIAFGYPEASREQVIAAAKAANADFFIKQLPQGYDTFLADAGESLSQ
GQRQLLTIARIFVHIPKILILDEATSSIDTRTEILVQEAFEKLMKGRTSFIIAHRLSTIQSADLILVMVDGNIVEQGNHK
DLMQKKGVYYQMQTAQDSLES

Nucleotide


Download         Length: 1746 bp        

>NTDB_id=62487 FNL60_RS05375 WP_002279944.1 1037154..1038899(+) (rcrQ) [Streptococcus mutans strain NBRC 13955]
ATGAAAGCTAGAAATAATAAAAATACCTTAAAGCGCTTGACTGCTGACTTTCTTAAGCAGAGAATTTTGGTTTTTCTTGC
CTTATTGGGTACTTTGATTCAGGTCAGCCTAACGGTTTATCTCCCAGTTCTAATTGGGCAAGCAGTTGATGCTGTTCTTG
CTAAAAATGTCCAGAAAATCTTACCGACAATCTTGATTAGCATGATTCTTGTTGTTGCCTTTAATACCATTATCCAATGG
ATCAATCCCTTGACTTACAATCGTTTGGTTTTCACTTATAGCCAGAAGCTTCGGCAGAATATCATTGAAAAACTTTATCG
CCTCCCTTTATCTTATTTGGATAAGCATTCTTCAGGTGATTTAGTCAGTCGTATAACAACGGATGTTGAACAATTATCCA
ACGGACTTTTAATGGTTTTTAATCAGTTTTTCGTAGGTATTTTGACTATTTTGTTAACCATCATAACAATGGCGAAGCTA
GACTTTTTTATGATGATTTTGGTACTGGTCTTAACACCACTTTCCTTATTTGTTGCTCGTTTTATTGCTCAAAAGAGTTA
TCATCTTTATCAAAGACAAACCAGAGCCAGAGGAGCATTTACTCAACATATTGAGGAGAGTCTTCGTCAGGAAAGTTTGA
TTCAAAGCTTCAATGCTCAAGATCAATTTATTCACACTTTTGATCATCTAAATAGCAAATATGCTAAGTATTCACAAGGT
GCTATTTTCTATTCATCTACAGTCAATCCCGCGACACGTTTTATCAATGCCTTAATTTATGCGCTCTTAGCTGGTATCGG
AGCATTACGCATTATGAATGGGAATTTTACTGTGGGGCAATTGACCACTTTCTTGAATTATGTCACTCAATATACCAAAC
CCTTTAATGACATTTCAGCCGTTCTATCTGAATTACAAAGTGCTTTAGCATGTGCAGAACGTCTCTATATGATTCTTGAT
GAAAAGGATGCTAAGGATGATGGCAAGAAAGAATTAGTCAGTGAATCTGTTAAAGGTGCTATTGCCTTTGATAAGATTAG
TTTTGGTTATGATGAGAAACAAACTCTGATTAAGAATTTGTCTGTCAATATTCCACAAGGTTCCAAAGTGGCTATCGTTG
GTCCTACAGGGGCTGGAAAATCAACTCTCATTAATTTGCTGATGCGATTTTATGATTTGCGAGAAGGGCAAATACTGCTA
GATGGGCAAGCAATCACTGATTATAGTAAAGCTTCTTATCGTCAGCAGATTGGTATGGTCTTACAAGAAACTTGGTTGAA
AACGGCTACTGTTTTGGAAAATATTGCCTTTGGTTATCCTGAAGCTAGCCGCGAGCAAGTGATTGCAGCGGCAAAAGCAG
CTAATGCCGACTTTTTTATAAAACAACTTCCTCAAGGTTACGATACTTTTTTGGCCGATGCAGGAGAATCCCTATCACAA
GGGCAAAGGCAATTGTTAACGATAGCACGAATTTTTGTTCATATTCCTAAAATATTAATCTTGGATGAAGCAACTTCCTC
CATTGATACACGAACAGAAATCTTGGTCCAAGAAGCATTTGAAAAGCTTATGAAAGGACGGACCAGCTTTATTATTGCAC
ATAGATTGTCAACTATTCAAAGCGCAGACCTTATCTTAGTTATGGTAGATGGCAATATTGTTGAACAAGGAAATCATAAA
GACTTGATGCAGAAAAAAGGTGTCTATTATCAAATGCAGACAGCACAGGATAGCCTTGAAAGCTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(358-506)

ABC transporter transmembrane region (ABC_membrane)

(24-294)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

38.225

100

0.386

Multiple sequence alignment