Detailed information NTG0624665

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: LMT64_RS10015
• Genome accession: NZ_CP086380
• Coordinates: 1990486..1991601 (+)
• Length: 371 a.a.
• NCBI ID: WP_126352576.1
• Uniprot ID: -
• Organism: Deinococcus radiophilus strain ATCC 27603
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1985486..1996601

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LMT64_RS09995 (LMT64_09995)	-	1986014..1987465 (+)	1452	WP_126352583.1	dihydrolipoamide acetyltransferase family protein	-
LMT64_RS10000 (LMT64_10000)	-	1987970..1988326 (+)	357	WP_229253204.1	hypothetical protein	-
LMT64_RS10005 (LMT64_10005)	-	1988326..1988985 (+)	660	WP_126352579.1	response regulator transcription factor	-
LMT64_RS10010 (LMT64_10010)	-	1989021..1990424 (+)	1404	WP_126352578.1	HAMP domain-containing sensor histidine kinase	-
LMT64_RS10015 (LMT64_10015)	dprA	1990486..1991601 (+)	1116	WP_126352576.1	DNA-processing protein DprA	Machinery gene
LMT64_RS10020 (LMT64_10020)	-	1991707..1992267 (-)	561	WP_126352574.1	DUF2231 domain-containing protein	-
LMT64_RS10025 (LMT64_10025)	-	1992397..1993140 (+)	744	WP_170166021.1	FAD-dependent oxidoreductase	-
LMT64_RS10030 (LMT64_10030)	-	1993137..1994117 (+)	981	WP_126352571.1	tRNA (guanosine(46)-N(7))-methyltransferase TrmB	-
LMT64_RS10035 (LMT64_10035)	-	1994157..1994573 (-)	417	WP_170166020.1	PIN domain-containing protein	-
LMT64_RS10040 (LMT64_10040)	-	1994602..1995546 (+)	945	WP_126352567.1	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	-
LMT64_RS10045 (LMT64_10045)	-	1995605..1995805 (-)	201	WP_126352565.1	hypothetical protein	-

Sequence

Protein

• Length: 371 a.a.
• Molecular weight: 38339.52 Da
• Isoelectric Point: 6.3074

>NTDB_id=624665 LMT64_RS10015 WP_126352576.1 1990486..1991601(+) (dprA) [Deinococcus radiophilus strain ATCC 27603]
MSRFPSDPALDQSAELRALLALRLTPGLGPRRIEALRQHFGSAVGALAAPPSALSGVEGLDRRSAAAVTKPAYDAAAQEL
ERVAQARSEGKDIRLLGRGFPDYPPALEALGDPPAVLWVRGPLPDLPASPYTVGIVGTRGASPHALSLTRQIATDLSSAG
VTVVSGLARGVDTAAHTAAVEAGALSIGVVGTGVDRVYPAENVDLARRLSLVSEYPLGTGPQAHHFPQRNRLIAALSSAV
LVVEGELKSGSLITATHALECGRTVFAVPGRAGDPRAAGPHRLLREGAVLTESAADILTELGWTGVGGTSITSPPDLPGE
QAAVLAALTEPRTLDDLSAQTGLSLSDLQTTLMMLQLAGHAEESGGRWLRR

Nucleotide

• Length: 1116 bp

>NTDB_id=624665 LMT64_RS10015 WP_126352576.1 1990486..1991601(+) (dprA) [Deinococcus radiophilus strain ATCC 27603]
GTGAGTCGCTTTCCATCTGACCCGGCGCTGGATCAGTCGGCTGAGCTGCGGGCCCTGCTTGCCCTGCGGTTGACCCCAGG
GCTCGGGCCACGCCGGATTGAGGCCTTGCGGCAGCACTTCGGGTCGGCGGTAGGCGCATTGGCGGCACCACCATCAGCCC
TAAGTGGAGTGGAGGGGCTGGACCGACGCTCGGCAGCTGCAGTCACCAAACCTGCCTACGACGCAGCTGCACAGGAGTTG
GAACGGGTGGCTCAAGCCCGCAGCGAGGGCAAAGATATTCGGCTGCTAGGACGTGGGTTCCCTGACTACCCACCTGCTCT
GGAAGCCCTGGGTGACCCACCAGCCGTGCTGTGGGTGCGCGGTCCACTGCCCGACTTGCCTGCGTCACCGTATACGGTAG
GGATTGTCGGCACCCGTGGGGCCAGTCCCCATGCTCTTAGCCTGACCCGGCAGATCGCCACTGACCTGAGCTCTGCAGGG
GTCACGGTGGTGAGTGGCCTGGCACGGGGAGTAGATACCGCGGCCCATACCGCAGCAGTAGAGGCCGGAGCGCTGAGTAT
CGGTGTGGTGGGGACTGGGGTGGACCGGGTGTACCCGGCTGAAAATGTGGATCTGGCCCGCCGTCTGAGTCTGGTCAGTG
AGTACCCACTGGGCACTGGACCACAGGCCCATCACTTTCCCCAGCGCAACCGTTTGATCGCGGCCCTGTCCAGCGCCGTG
TTGGTGGTGGAGGGAGAGCTGAAATCCGGCTCCTTGATTACGGCCACACACGCGCTGGAGTGTGGCCGCACGGTGTTTGC
CGTCCCAGGCCGCGCGGGCGATCCCCGGGCGGCTGGCCCTCACCGCCTGTTGCGTGAAGGCGCCGTGCTCACCGAATCCG
CTGCGGACATCCTGACCGAACTGGGGTGGACAGGCGTAGGGGGCACATCTATAACCTCTCCACCCGATCTGCCCGGTGAA
CAGGCCGCCGTGCTGGCGGCCCTGACCGAACCCCGTACACTGGATGATCTATCAGCACAGACGGGGCTATCTCTCAGCGA
CTTGCAAACCACGCTGATGATGCTGCAACTGGCTGGACATGCTGAGGAAAGCGGTGGGCGCTGGCTACGGCGCTAA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (313-366)

• DNA recombination-mediator protein A (DNA_processg_A) (91-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	65.46	96.765	0.633