Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | N135_RS05585 | Genome accession | NC_022362 |
| Coordinates | 1052317..1052619 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni subsp. jejuni 00-2425 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1047317..1057619
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N135_RS05560 (N135_01109) | rpsR | 1047679..1047939 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| N135_RS05565 (N135_01110) | lon | 1048000..1050375 (-) | 2376 | WP_002858084.1 | endopeptidase La | - |
| N135_RS05570 (N135_01111) | - | 1050392..1051039 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| N135_RS05575 (N135_01112) | fliW | 1051200..1051589 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| N135_RS05580 (N135_01113) | proC | 1051589..1052320 (+) | 732 | WP_002858388.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| N135_RS05585 (N135_01114) | ctsT | 1052317..1052619 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| N135_RS05590 (N135_01115) | - | 1052616..1053278 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| N135_RS05595 (N135_01116) | - | 1053275..1053727 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| N135_RS05600 (N135_01117) | hemD | 1053724..1054353 (-) | 630 | WP_002858312.1 | uroporphyrinogen-III synthase | - |
| N135_RS05605 (N135_01118) | thiE | 1054331..1054963 (-) | 633 | WP_002858441.1 | thiamine phosphate synthase | - |
| N135_RS05610 (N135_01119) | thiD | 1054953..1055765 (-) | 813 | WP_002858043.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| N135_RS05615 (N135_01120) | - | 1055762..1056448 (-) | 687 | WP_002858132.1 | endonuclease III domain-containing protein | - |
| N135_RS05620 (N135_01121) | - | 1056445..1057206 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=62219 N135_RS05585 WP_002853046.1 1052317..1052619(+) (ctsT) [Campylobacter jejuni subsp. jejuni 00-2425]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=62219 N135_RS05585 WP_002853046.1 1052317..1052619(+) (ctsT) [Campylobacter jejuni subsp. jejuni 00-2425]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |