Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   LK422_RS04130 Genome accession   NZ_CP085976
Coordinates   838937..840775 (+) Length   612 a.a.
NCBI ID   WP_021651327.1    Uniprot ID   U2CND5
Organism   Blautia massiliensis (ex Durand et al. 2017) strain FDAARGOS_1576     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 833937..845775
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LK422_RS04115 (LK422_04115) - 835789..835962 (+) 174 WP_044961487.1 DUF4250 domain-containing protein -
  LK422_RS04120 (LK422_04120) - 836267..836785 (+) 519 WP_021651325.1 MarR family winged helix-turn-helix transcriptional regulator -
  LK422_RS04125 (LK422_04125) - 836778..838940 (+) 2163 WP_021651326.1 ABC transporter ATP-binding protein -
  LK422_RS04130 (LK422_04130) rcrQ 838937..840775 (+) 1839 WP_021651327.1 ABC transporter ATP-binding protein Regulator
  LK422_RS04135 (LK422_04135) - 840958..841278 (+) 321 WP_021651328.1 putative heavy metal-binding protein -
  LK422_RS04140 (LK422_04140) - 841284..843419 (+) 2136 WP_021651329.1 HelD family protein -
  LK422_RS04145 (LK422_04145) - 843546..844676 (-) 1131 WP_021651330.1 pyridoxal-phosphate-dependent aminotransferase family protein -
  LK422_RS04150 (LK422_04150) - 844725..845288 (-) 564 WP_044961472.1 ECF transporter S component -

Sequence

Protein


Download         Length: 612 a.a.        Molecular weight: 68673.15 Da        Isoelectric Point: 6.3043

>NTDB_id=621837 LK422_RS04130 WP_021651327.1 838937..840775(+) (rcrQ) [Blautia massiliensis (ex Durand et al. 2017) strain FDAARGOS_1576]
MSQQRRRGPMGGHGMQPTEKAKDFKGSMKKLFGYMGRYKFRFILMFIFAVAGTAFNIAGPKILGKATTELFNGLVAKVNG
TGGIDFSKIGMILLWTLGLYVASACFSLIQGFVMTGISNDVTYNLRKDISKKINRLPMNYFESRTNGEILSRVTNDVDTL
QMSINQSMTQLITSVTTLIGVFIMMLSINVWMTLAAVLILPVSMLIINKVMKHSQKYFQAQQEYLGKVNGQVEENFGGHD
VVRVFNKEQDVLKEFEHDNQKLYESAWKSQFFSGMMMPIMQFVGNLGYVMVALLGGLFAIKGTIEVGDIQSFFQYIRNFT
QPIQQIAQVTNLLQSSAAASERVFEFLEEPEEELQPENPDSIEGLEGNVQFEHVKFGYNPDKIIVNDFSADVHDGQKIAI
VGPTGAGKTTIVKLLMRFYDVNGGSIKVDGHDIRNFNRSNLREMFGMVLQDTWLFSGTIMENIRYGRLDATDEEVIAAAK
AAHIHNFIMQQPGGYQMVLDEETSNVSQGQKQLLTIARAILADNKILILDEATSSVDTRTEMQIQKAMDNLMKGRTSFVI
AHRLSTIKDADLILVMKDGDIIEQGDHEELLARKGFYADLYNSQFEKKEAQA

Nucleotide


Download         Length: 1839 bp        

>NTDB_id=621837 LK422_RS04130 WP_021651327.1 838937..840775(+) (rcrQ) [Blautia massiliensis (ex Durand et al. 2017) strain FDAARGOS_1576]
ATGAGTCAGCAGAGAAGAAGAGGCCCGATGGGCGGACACGGAATGCAGCCAACAGAGAAGGCCAAGGACTTCAAAGGCTC
CATGAAAAAGCTCTTTGGCTATATGGGCAGATATAAATTCCGTTTTATCCTGATGTTTATCTTTGCAGTGGCAGGTACAG
CGTTTAATATTGCAGGCCCGAAGATCCTTGGAAAAGCTACCACAGAGCTGTTCAATGGTCTGGTTGCCAAGGTAAACGGT
ACAGGCGGTATTGATTTCAGTAAGATCGGAATGATCCTTCTGTGGACTTTGGGACTGTATGTGGCAAGTGCATGCTTTTC
CCTGATCCAGGGATTTGTCATGACGGGGATCTCCAATGATGTCACATACAATCTCCGAAAGGATATTTCAAAGAAGATCA
ACCGTCTGCCAATGAATTATTTCGAGAGCAGAACAAACGGTGAGATCCTTTCCAGGGTGACAAATGATGTGGATACCCTG
CAAATGAGCATCAACCAGAGCATGACACAGCTGATCACATCCGTAACAACACTGATCGGTGTATTTATCATGATGCTTTC
CATCAACGTGTGGATGACACTGGCAGCAGTGCTGATCCTGCCGGTTTCCATGCTTATCATTAATAAAGTAATGAAACACT
CCCAGAAATATTTCCAGGCACAGCAGGAGTATCTGGGAAAAGTAAATGGTCAGGTGGAGGAAAATTTCGGCGGCCATGAT
GTGGTAAGAGTATTCAACAAAGAGCAGGATGTGCTGAAGGAATTTGAGCATGACAACCAGAAGCTTTATGAGTCTGCATG
GAAGTCACAGTTCTTTTCCGGAATGATGATGCCGATCATGCAGTTTGTGGGAAATCTGGGATATGTGATGGTGGCACTTC
TCGGAGGGCTTTTTGCCATCAAAGGAACTATCGAGGTTGGAGATATCCAGTCCTTCTTCCAGTATATCCGTAACTTTACA
CAGCCGATCCAGCAGATCGCCCAGGTTACAAACCTTCTACAGTCCTCGGCGGCAGCTTCTGAGAGGGTATTTGAATTTCT
TGAGGAGCCGGAGGAAGAGCTTCAGCCGGAGAATCCGGATTCCATTGAGGGACTGGAAGGAAATGTACAGTTTGAGCATG
TGAAATTCGGTTATAATCCGGATAAGATCATTGTAAATGATTTTTCCGCAGATGTGCATGACGGTCAGAAGATCGCCATT
GTAGGACCTACAGGTGCAGGAAAAACGACGATCGTAAAGCTGCTGATGCGTTTTTATGATGTAAATGGCGGAAGCATCAA
GGTTGACGGACATGATATCCGTAACTTTAACCGCAGCAATCTCCGTGAGATGTTCGGAATGGTGCTGCAGGACACCTGGC
TGTTTTCCGGAACCATTATGGAAAATATCCGCTACGGAAGACTGGACGCAACGGATGAAGAGGTGATCGCAGCAGCAAAA
GCGGCCCATATCCACAACTTTATCATGCAGCAGCCCGGCGGCTATCAGATGGTCCTGGATGAGGAAACCAGTAATGTTTC
TCAGGGGCAGAAGCAGCTGCTTACCATTGCAAGAGCAATTCTGGCAGACAATAAGATCCTGATCCTGGATGAGGCCACAT
CTTCCGTTGATACAAGAACAGAGATGCAGATCCAGAAGGCTATGGATAACCTGATGAAGGGCAGAACCAGCTTTGTTATC
GCCCACAGACTTTCTACCATTAAGGATGCAGATCTGATTCTTGTCATGAAGGACGGAGATATCATTGAGCAGGGAGATCA
TGAAGAGCTGCTGGCACGTAAGGGATTTTATGCGGATCTGTATAACAGTCAGTTTGAGAAAAAAGAGGCTCAGGCGTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(386-534)

ABC transporter transmembrane region (ABC_membrane)

(42-322)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB U2CND5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

51.195

95.752

0.49