Detailed information NTG0619584

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: LIS76_RS17335
• Genome accession: NZ_CP085717
• Coordinates: 3543185..3545575 (-)
• Length: 796 a.a.
• NCBI ID: WP_252290932.1
• Uniprot ID: -
• Organism: Peribacillus asahii strain CMF4
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3538185..3550575

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LIS76_RS17320 (LIS76_17375)	-	3540998..3542074 (-)	1077	WP_252290928.1	AI-2E family transporter	-
LIS76_RS17325 (LIS76_17380)	-	3542333..3542521 (-)	189	WP_252295507.1	hypothetical protein	-
LIS76_RS17330 (LIS76_17385)	-	3542538..3542990 (-)	453	WP_252290930.1	PRC-barrel domain-containing protein	-
LIS76_RS17335 (LIS76_17390)	recD2	3543185..3545575 (-)	2391	WP_252290932.1	ATP-dependent RecD-like DNA helicase	Machinery gene
LIS76_RS17340 (LIS76_17395)	-	3545611..3546276 (-)	666	WP_252286813.1	tetratricopeptide repeat protein	-
LIS76_RS17345 (LIS76_17400)	mnmA	3546370..3547485 (-)	1116	WP_252290935.1	tRNA 2-thiouridine(34) synthase MnmA	-
LIS76_RS17350 (LIS76_17405)	-	3547499..3548644 (-)	1146	WP_252290937.1	cysteine desulfurase family protein	-
LIS76_RS17355 (LIS76_17410)	-	3548766..3549185 (-)	420	WP_127761470.1	Rrf2 family transcriptional regulator	-

Sequence

Protein

• Length: 796 a.a.
• Molecular weight: 90079.87 Da
• Isoelectric Point: 4.9630

>NTDB_id=619584 LIS76_RS17335 WP_252290932.1 3543185..3545575(-) (recD2) [Peribacillus asahii strain CMF4]
MSQQEALDLFSEEKQFMKGRHLVTIFHNEENMYSVVRIRLDETNLNYDEQEAVVTGYFPRIHEHETYIFYGVLKEHPRFG
LQFQVNHFRKDLPQSKEGIVAYLSGDMFKGIGKKTAESIVETLGENAISKILAQPSVLDNIPRLSGEKAKALYDTLLENE
GLEQVMIALNQYGFGPQLSMKIYQMYKQDTVSIIQSNPYKLVEDIEGIGFGRADELGFQLGISGGHPDRIKAACLYCLDT
QCMQDGHVYMEAEELLESVQRLLEENKRDVIEFTNISSEIIKLEAERKIVVEETRIYLPALYFSEKGIVMNIQRLLQQTE
YEDQFPESEFLLALGELEERLGVTYAPAQKEAIQTALQSPMLILTGGPGTGKTTVIKGIVELYSELHGVSMNIKDYKKDE
EPFPFVLAAPTGRAAKRMAESTGLPAVTIHRLLGWNGSEGFAHDTDNPIEGRIVIIDEMSMVDTWLAHQLLKALPEHSQL
ILVGDEDQLPSVGPGQVLKDLLASKAIPTIALQHIYRQADGSSIIELAHEMKKGHVPHDVAKQQVDRSFIRCQQSQMADV
IKQVVQNARKKGYSSRDIQVLAPMYKGPAGIDVLNKMLQEVLNGDSEKKRRELQFGDVVYRTGDKVLQLVNQPEEGVFNG
DMGEIVTIIFAKENTDHVDKVVISFEGIEVTYTKQDLNQITHAYCCSIHKSQGSEFPIVILPVVRSYYRMLRRNLLYTAI
TRSKDFLIICGEEEAFRLGVERNDETQRRTTLREKLQEIHAGSDTKVIEEGESYLDRLMNEDPMIGMGDVTPYHFM

Nucleotide

• Length: 2391 bp

>NTDB_id=619584 LIS76_RS17335 WP_252290932.1 3543185..3545575(-) (recD2) [Peribacillus asahii strain CMF4]
TTGAGTCAACAAGAGGCTTTAGATTTGTTTTCGGAAGAGAAGCAGTTTATGAAAGGGCGGCACTTAGTGACGATTTTTCA
TAATGAGGAAAATATGTATTCTGTTGTTCGGATTCGCTTGGATGAAACAAATTTGAATTATGATGAGCAGGAAGCTGTCG
TGACTGGTTATTTCCCACGTATTCATGAGCATGAAACTTATATTTTTTACGGAGTATTAAAGGAGCATCCTCGCTTTGGT
CTACAGTTTCAAGTTAATCATTTTCGCAAAGATTTGCCACAGTCGAAGGAAGGCATTGTGGCTTATTTATCCGGCGATAT
GTTTAAAGGAATTGGGAAGAAGACGGCAGAAAGCATTGTGGAAACACTTGGTGAAAATGCAATTTCAAAAATTTTAGCGC
AGCCTTCCGTACTGGATAATATTCCGCGTTTGTCCGGTGAGAAAGCAAAAGCTTTATATGATACATTGCTTGAAAATGAG
GGTCTTGAGCAAGTGATGATTGCACTGAATCAATATGGTTTTGGACCGCAGCTTTCGATGAAAATTTATCAAATGTATAA
ACAGGATACGGTTTCTATTATTCAAAGTAACCCATATAAACTTGTAGAGGATATTGAGGGAATTGGTTTTGGACGGGCAG
ATGAACTTGGATTTCAGCTAGGCATTTCCGGGGGGCATCCAGACCGTATTAAAGCGGCTTGCCTATATTGCCTTGACACG
CAATGCATGCAGGATGGACATGTCTATATGGAGGCGGAGGAATTATTAGAGTCCGTTCAACGTTTATTGGAAGAAAATAA
GCGTGATGTCATTGAATTTACGAATATTTCCTCAGAAATAATCAAATTAGAAGCGGAAAGAAAGATTGTTGTCGAGGAAA
CACGTATTTATTTGCCTGCTTTGTACTTCTCGGAAAAAGGAATTGTCATGAATATTCAACGGCTCCTCCAACAAACAGAG
TATGAAGACCAGTTTCCAGAATCGGAGTTTTTATTAGCGCTTGGTGAATTGGAGGAGCGTCTTGGTGTGACGTACGCTCC
CGCACAAAAAGAAGCGATTCAGACGGCTTTGCAATCGCCTATGCTCATTTTAACAGGCGGCCCGGGAACAGGGAAAACGA
CGGTCATTAAGGGCATTGTGGAGCTATATAGTGAGCTTCATGGCGTGTCGATGAACATAAAAGATTATAAAAAGGATGAG
GAGCCGTTTCCCTTTGTGCTTGCTGCGCCAACTGGCCGTGCAGCTAAACGAATGGCAGAATCTACTGGTCTGCCGGCTGT
GACGATTCATCGGCTGCTCGGTTGGAATGGCAGTGAAGGGTTTGCTCATGATACAGACAATCCTATTGAGGGGCGCATTG
TGATTATTGATGAGATGTCGATGGTCGACACATGGCTGGCTCATCAATTGTTGAAAGCATTGCCAGAGCATAGTCAGCTC
ATTCTTGTTGGGGATGAAGACCAGTTGCCGTCTGTTGGTCCTGGGCAAGTGCTGAAGGATTTACTAGCTTCAAAAGCTAT
TCCAACGATTGCTCTCCAACATATTTATCGTCAAGCAGATGGTTCTTCGATTATTGAACTTGCTCATGAAATGAAAAAAG
GCCATGTGCCGCATGATGTGGCAAAGCAACAAGTTGATCGTTCTTTTATTCGATGTCAACAGAGCCAAATGGCTGATGTC
ATTAAGCAGGTCGTTCAAAATGCACGTAAAAAGGGGTATAGTTCACGTGACATTCAAGTACTTGCCCCAATGTATAAAGG
TCCGGCTGGGATTGATGTACTGAACAAGATGCTCCAAGAAGTATTAAATGGAGACAGCGAGAAAAAACGTCGTGAGTTGC
AATTTGGTGATGTTGTCTATCGAACAGGTGATAAAGTGTTACAGCTTGTGAATCAGCCTGAAGAAGGTGTTTTCAATGGA
GACATGGGCGAAATTGTAACGATTATATTTGCTAAAGAAAATACCGATCATGTAGATAAAGTTGTTATTTCCTTTGAAGG
CATTGAAGTGACGTATACGAAGCAGGATTTAAACCAAATCACACATGCGTATTGCTGTTCCATACATAAATCACAGGGAA
GCGAGTTTCCAATTGTTATTTTACCTGTTGTGCGAAGCTACTATAGAATGTTACGCCGAAATTTATTATATACGGCGATT
ACACGCAGCAAGGATTTTCTCATTATATGTGGAGAAGAAGAAGCATTTCGCCTTGGAGTGGAACGTAATGATGAAACACA
GCGCCGGACAACATTGCGGGAAAAATTACAGGAAATACATGCAGGAAGCGATACTAAAGTTATTGAAGAAGGTGAATCAT
ACCTCGATCGCTTAATGAATGAGGACCCGATGATTGGCATGGGCGATGTAACTCCGTACCATTTTATGTAA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (345-554)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (682-730)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (594-665)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-249)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	60.474	100	0.609