Detailed information NTG0618197

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: NVS73_RS14935
• Genome accession: NZ_CP102769
• Coordinates: 2811931..2813196 (+)
• Length: 421 a.a.
• NCBI ID: WP_004398500.1
• Uniprot ID: O34528
• Organism: Bacillus subtilis strain YZSR384
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2806931..2818196

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NVS73_RS14915 (NVS73_14920)	yrrB	2808302..2808922 (-)	621	WP_010886584.1	tetratricopeptide repeat protein	-
NVS73_RS14920 (NVS73_14925)	mnmA	2809008..2810123 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
NVS73_RS14925 (NVS73_14930)	iscSA	2810154..2811293 (-)	1140	WP_003246057.1	cysteine desulfurase family protein	-
NVS73_RS14930 (NVS73_14935)	cymR	2811312..2811728 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
NVS73_RS14935 (NVS73_14940)	rarA	2811931..2813196 (+)	1266	WP_004398500.1	replication-associated recombination protein A	Machinery gene
NVS73_RS14940 (NVS73_14945)	tcdA	2813238..2814002 (-)	765	WP_009967893.1	tRNA threonylcarbamoyladenosine dehydratase	-
NVS73_RS14950 (NVS73_14955)	aspS	2814338..2816116 (-)	1779	WP_003229758.1	aspartate--tRNA ligase	-
NVS73_RS14955 (NVS73_14960)	hisS	2816130..2817404 (-)	1275	WP_003229755.1	histidine--tRNA ligase	-
NVS73_RS14960 (NVS73_14965)	yrzK	2817786..2817956 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46514.38 Da
• Isoelectric Point: 7.2043

>NTDB_id=618197 NVS73_RS14935 WP_004398500.1 2811931..2813196(+) (rarA) [Bacillus subtilis strain YZSR384]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPELIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=618197 NVS73_RS14935 WP_004398500.1 2811931..2813196(+) (rarA) [Bacillus subtilis strain YZSR384]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGAACTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCAATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAGGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

3D structure

• AlphaFold DB: O34528

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	100	100	1