Detailed information NTG0616771

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: LG333_RS15835
• Genome accession: NZ_CP085270
• Coordinates: 3045552..3047954 (-)
• Length: 800 a.a.
• NCBI ID: WP_223490333.1
• Uniprot ID: -
• Organism: Sutcliffiella horikoshii strain ABH-536
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3040552..3052954

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LG333_RS15805 (LG333_15730)	-	3040854..3042212 (-)	1359	WP_223493671.1	NAD(P)-dependent oxidoreductase	-
LG333_RS15810 (LG333_15735)	-	3042344..3043234 (-)	891	WP_223490328.1	nitrilase-related carbon-nitrogen hydrolase	-
LG333_RS15815 (LG333_15740)	-	3043765..3043920 (-)	156	WP_010196047.1	YrzQ family protein	-
LG333_RS15820 (LG333_15745)	-	3043943..3044137 (-)	195	WP_047969446.1	hypothetical protein	-
LG333_RS15825 (LG333_15750)	-	3044153..3044626 (-)	474	WP_223490330.1	PRC-barrel domain-containing protein	-
LG333_RS15830 (LG333_15755)	-	3044813..3045466 (+)	654	WP_404468562.1	hypothetical protein	-
LG333_RS15835 (LG333_15760)	recD2	3045552..3047954 (-)	2403	WP_223490333.1	ATP-dependent RecD-like DNA helicase	Machinery gene
LG333_RS15840 (LG333_15765)	-	3047973..3048629 (-)	657	WP_223490335.1	tetratricopeptide repeat protein	-
LG333_RS15845 (LG333_15770)	mnmA	3048717..3049832 (-)	1116	WP_404468564.1	tRNA 2-thiouridine(34) synthase MnmA	-
LG333_RS15850 (LG333_15775)	-	3050071..3051222 (-)	1152	WP_223490339.1	cysteine desulfurase family protein	-
LG333_RS15855 (LG333_15780)	cymR	3051270..3051686 (-)	417	WP_088018959.1	cysteine metabolism transcriptional regulator CymR	-
LG333_RS15860 (LG333_15785)	-	3051719..3052393 (-)	675	WP_223490341.1	YitT family protein	-

Sequence

Protein

• Length: 800 a.a.
• Molecular weight: 89872.11 Da
• Isoelectric Point: 4.7938

>NTDB_id=616771 LG333_RS15835 WP_223490333.1 3045552..3047954(-) (recD2) [Sutcliffiella horikoshii strain ABH-536]
MKDQKQQSSLDLFEENEKFIKGSHLVTIFHNESNMYSVVRIRVTETNVAYDEKEAVVTGYFPRIHEDETYIFFGQMKEHP
RFGLQFHVEHFRKDIPQTRHGIVQYLSSDLFSGIGRKTAEKIADALGENAISKILENPSVLDSIPKLAGDKAKSLYDTLM
EHQGLEQVMIALSQFGFGPQLSMKIYQAYKDQTIETLQKNPYELVETVEGIGFARADELGNHFGISGNHPDRIRAGCLYM
LEQHSMQEGHCYVVEDQLTEAVVRLLNEKQHGLVAESDISREIMQLTEEGKVKAEEGKVYLPSLYFSEQGVVTNIKRVLE
QTQYADQFPESEFLLALGELEDRLKVQYAPSQKEAIQQALMTPMLLLTGGPGTGKTTVIKGIVELYADLHGCSLEPNDYS
KDDPFPIMLVAPTGRAAKRMSEATGLPSLTIHRLLGWNGSEGFQHDEENPISGKLLIVDEVSMVDIWLANQLFKSLPEDI
QVVLVGDEDQLPSVGPGQVLKDLLASKVIPTVQLTDIYRQADGSSIIELAHDMKDGTVPADISSGQKDRSFIKCGQSQIL
DVVKKVCANAQSKGYTARDIQVLAPMYRGTAGIDKLNEMLQELFNPKSDQRRELSFGNVVYRTGDKVLQLVNQPESHVFN
GDIGEVVSIFYAKENTEKQDMVIVSFDGNEVTYTKQDLGQITHAYCCSIHKSQGSEFPIVVLPVVKSYYRMLRRNLLYTA
VTRAKRFLILCGEEEALKLGVQRADEMARQTSLKERLQTKESGTLPDEEVIDPVLQEVPFWKDANIGMENVSPYDFMDEE

Nucleotide

• Length: 2403 bp

>NTDB_id=616771 LG333_RS15835 WP_223490333.1 3045552..3047954(-) (recD2) [Sutcliffiella horikoshii strain ABH-536]
ATGAAGGACCAAAAGCAGCAATCCTCACTCGATTTGTTCGAGGAAAATGAAAAGTTTATTAAAGGATCGCATCTTGTCAC
CATCTTCCATAATGAATCCAATATGTATTCAGTGGTGCGGATCCGAGTGACGGAGACGAATGTTGCGTATGATGAAAAAG
AAGCGGTCGTTACTGGTTATTTCCCTCGCATTCATGAAGACGAGACATACATATTTTTTGGACAGATGAAGGAACATCCT
CGTTTTGGGCTTCAATTTCATGTTGAGCACTTTCGTAAGGACATTCCACAAACACGACACGGTATTGTCCAATATCTATC
AAGCGATTTGTTTTCAGGAATCGGAAGAAAAACGGCTGAAAAAATTGCAGATGCACTTGGTGAAAATGCCATTTCCAAAA
TACTTGAGAATCCTTCTGTGTTGGATTCCATCCCAAAGCTTGCCGGTGATAAAGCGAAATCGTTATATGACACGTTGATG
GAACATCAAGGGTTGGAACAAGTAATGATTGCCTTGTCGCAGTTTGGTTTTGGTCCGCAATTGTCCATGAAAATTTATCA
GGCCTATAAAGATCAAACGATTGAAACGCTCCAAAAGAACCCGTACGAACTTGTGGAAACAGTAGAGGGTATTGGCTTTG
CCAGAGCAGATGAACTTGGAAATCACTTCGGGATATCCGGAAATCATCCAGACCGCATTAGGGCAGGCTGCCTGTATATG
CTAGAACAGCATTCCATGCAGGAGGGTCACTGTTACGTGGTTGAAGACCAGCTTACTGAAGCGGTCGTCAGACTATTAAA
CGAAAAGCAGCATGGCCTTGTTGCAGAGTCTGACATTTCTCGGGAAATTATGCAATTGACTGAAGAAGGAAAGGTTAAAG
CGGAAGAAGGGAAAGTCTATTTACCTAGTCTCTATTTTTCAGAGCAAGGTGTGGTAACCAATATCAAAAGGGTGCTGGAG
CAAACTCAATATGCCGACCAGTTTCCTGAGTCAGAATTCCTTCTTGCCTTAGGTGAATTAGAAGACAGATTGAAGGTTCA
ATATGCTCCTTCGCAAAAAGAAGCCATACAGCAAGCATTAATGACTCCCATGCTTCTTTTGACAGGTGGGCCAGGGACAG
GTAAAACGACCGTTATTAAAGGAATCGTTGAACTGTACGCAGACCTTCATGGTTGTTCATTGGAACCTAATGATTACAGC
AAAGATGATCCTTTTCCGATTATGCTTGTCGCCCCAACAGGCCGTGCTGCCAAACGCATGAGCGAGGCGACTGGCCTTCC
TTCTCTTACTATTCATAGGCTACTCGGTTGGAATGGTTCGGAAGGGTTTCAACATGACGAAGAAAACCCCATCTCAGGTA
AGCTTTTGATTGTGGATGAAGTGTCAATGGTGGATATTTGGCTTGCCAATCAACTGTTTAAATCTCTTCCTGAGGATATA
CAAGTCGTATTAGTGGGGGATGAAGATCAGCTTCCTTCCGTTGGTCCAGGCCAAGTGTTAAAGGACTTACTCGCATCCAA
AGTCATTCCTACCGTTCAATTGACTGATATCTACAGACAGGCAGATGGTTCATCCATCATTGAGTTGGCCCACGATATGA
AGGATGGTACAGTGCCAGCAGACATATCATCCGGACAGAAGGACCGTTCTTTTATCAAATGCGGACAGTCGCAAATATTG
GATGTAGTAAAAAAAGTATGTGCCAACGCGCAAAGCAAGGGCTATACTGCCCGCGATATCCAGGTGCTTGCACCAATGTA
CAGAGGGACAGCGGGAATAGATAAACTTAATGAAATGCTTCAGGAGCTTTTCAATCCTAAAAGTGACCAGCGGCGTGAAT
TAAGCTTCGGCAATGTTGTATACAGGACCGGAGATAAAGTGCTGCAGCTTGTCAATCAACCGGAAAGTCATGTGTTCAAC
GGTGACATAGGTGAAGTGGTTTCCATCTTTTATGCGAAAGAAAATACCGAAAAACAGGACATGGTCATCGTATCCTTTGA
TGGCAATGAAGTTACTTATACGAAGCAAGATCTCGGGCAGATAACCCATGCATATTGTTGTTCTATACATAAGTCTCAAG
GAAGTGAGTTTCCGATTGTGGTATTGCCTGTAGTAAAGAGCTATTACAGGATGTTACGACGAAATCTACTTTACACAGCT
GTTACAAGAGCGAAGAGATTTTTAATTCTTTGCGGCGAAGAAGAAGCATTAAAGCTTGGCGTGCAACGCGCGGATGAGAT
GGCAAGGCAAACATCCTTGAAAGAAAGGCTTCAAACAAAAGAGTCCGGAACTTTACCAGACGAGGAAGTCATTGATCCTG
TACTTCAAGAAGTTCCTTTTTGGAAAGACGCTAACATCGGCATGGAGAATGTCAGTCCATATGATTTTATGGATGAAGAA
TAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (596-666)

• Helix-hairpin-helix containing domain (HHH_RecD2) (161-252)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (683-731)

• AAA domain (AAA_30) (348-556)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	63.784	99.75	0.636