Detailed information NTG0616232

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: LG307_RS15945
• Genome accession: NZ_CP085237
• Coordinates: 3039006..3041408 (-)
• Length: 800 a.a.
• NCBI ID: WP_404443961.1
• Uniprot ID: -
• Organism: Sutcliffiella horikoshii strain ADH2-198
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3034006..3046408

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LG307_RS15915 (LG307_15855)	-	3034520..3035839 (-)	1320	WP_404450475.1	NAD(P)-dependent oxidoreductase	-
LG307_RS15920 (LG307_15860)	-	3036009..3036899 (-)	891	WP_148987725.1	nitrilase-related carbon-nitrogen hydrolase	-
LG307_RS15925 (LG307_15865)	-	3037240..3037395 (-)	156	WP_082153507.1	YrzQ family protein	-
LG307_RS15930 (LG307_15870)	-	3037418..3037612 (-)	195	WP_047969446.1	hypothetical protein	-
LG307_RS15935 (LG307_15875)	-	3037628..3038101 (-)	474	WP_404443955.1	PRC-barrel domain-containing protein	-
LG307_RS15940 (LG307_15880)	-	3038288..3038911 (+)	624	WP_404443958.1	hypothetical protein	-
LG307_RS15945 (LG307_15885)	recD2	3039006..3041408 (-)	2403	WP_404443961.1	ATP-dependent RecD-like DNA helicase	Machinery gene
LG307_RS15950 (LG307_15890)	-	3041427..3042083 (-)	657	WP_404443963.1	tetratricopeptide repeat protein	-
LG307_RS15955 (LG307_15895)	mnmA	3042171..3043286 (-)	1116	WP_404443966.1	tRNA 2-thiouridine(34) synthase MnmA	-
LG307_RS15960 (LG307_15900)	-	3043305..3044453 (-)	1149	WP_404443969.1	cysteine desulfurase family protein	-
LG307_RS15965 (LG307_15905)	cymR	3044500..3044916 (-)	417	WP_088018959.1	cysteine metabolism transcriptional regulator CymR	-
LG307_RS15970 (LG307_15910)	-	3044949..3045623 (-)	675	WP_404443971.1	YitT family protein	-

Sequence

Protein

• Length: 800 a.a.
• Molecular weight: 89939.33 Da
• Isoelectric Point: 4.8394

>NTDB_id=616232 LG307_RS15945 WP_404443961.1 3039006..3041408(-) (recD2) [Sutcliffiella horikoshii strain ADH2-198]
MKDQKQQSSLDLFEEHEKFIKGSHLVTIFHNESNMYSVVRIRVTETNVAYDEKEAVVTGYFPRIHEDETYIFFGQMKEHP
RFGLQFHVEHFRKDIPQTRHGIVQYLSSDLFSGIGRKTAEKIADALGENTISKILENPSVLDSIPKLAGDKAKLLYDTLM
EHQGLEQVMIALSQFGFGPQLSMKIYQAYKDQTIETLQKNPYALVETVEGIGFARADELGNDFGISGNHPDRIRAGCLYM
LEQHSMQDGHCYVYENQLTEAVVRLLNEKQHGLVADSDISREILQLTEEGKLKAEEGKVYLPSLYFSEQGVVTNIQRVLE
QTQYAEQFPESEFLLALGELEDRLKVQYAPSQKEAIQQALMTPMLLLTGGPGTGKTTVIKGIVELYADLHGCSLEPNDYS
KEDPFPIMLVAPTGRAAKRMSEATGLPSVTIHRLLGWNGSEGFQHDEENPIPGKLLIVDEVSMVDIWLANQLFKSLPQDV
QVVLVGDEDQLPSVGPGQVLKDLLASKVIPTVQLTDIYRQADGSSIIELAHDMKDGLVPADISSGQKDRSFIKCGQTQIL
DVVKKVCANAQSKGYSARDIQVLAPMYRGTAGIDKLNEMLQELFNPKSDQRRELSFGNVVYRTGDKVLQLVNQPESHVFN
GDIGEVVSIFYAKENTEKQDMVIVSFDGNEVTYTKQDLGQITHAYCCSIHKSQGSEFPIVVLPVVKSYYRMLRRNLLYTA
VTRAKRFLILCGEEEALKLGVQRADEMARQTSLKERLQIKQSGTLPDEEVMDPVLQEVPFWKDASIGMENISPYDFMDEE

Nucleotide

• Length: 2403 bp

>NTDB_id=616232 LG307_RS15945 WP_404443961.1 3039006..3041408(-) (recD2) [Sutcliffiella horikoshii strain ADH2-198]
ATGAAGGACCAAAAGCAACAATCCTCTCTCGATTTATTCGAGGAACATGAAAAGTTTATAAAAGGATCGCATCTAGTCAC
CATTTTCCATAATGAATCCAATATGTATTCAGTGGTGAGGATCAGGGTGACGGAGACGAATGTTGCATATGATGAAAAAG
AAGCGGTCGTTACTGGTTATTTCCCTCGTATCCATGAAGACGAGACATACATATTTTTTGGACAGATGAAGGAACACCCC
CGGTTCGGTCTCCAATTCCATGTAGAGCACTTTCGTAAGGATATTCCGCAAACAAGACACGGTATTGTCCAATATCTTTC
AAGTGATCTCTTTTCAGGAATAGGAAGAAAGACAGCAGAGAAAATAGCGGATGCACTTGGTGAAAATACTATTTCCAAAA
TATTGGAAAATCCTTCTGTGTTGGATTCCATCCCAAAGCTTGCCGGCGATAAGGCAAAACTGCTGTATGACACGTTGATG
GAACATCAAGGTTTAGAGCAGGTCATGATTGCCCTGTCACAGTTTGGATTTGGACCTCAGCTTTCCATGAAAATTTATCA
AGCCTATAAAGATCAAACGATTGAAACCCTTCAGAAAAACCCGTATGCGCTTGTGGAAACAGTGGAAGGCATCGGGTTCG
CTAGAGCAGATGAACTTGGAAATGATTTCGGGATATCAGGCAATCATCCAGATCGCATCAGGGCAGGCTGCTTGTATATG
TTGGAACAGCATTCCATGCAGGATGGCCACTGTTATGTGTACGAGAATCAGCTTACCGAAGCGGTCGTCAGGCTACTAAA
CGAAAAGCAACATGGTTTAGTTGCAGACTCTGACATTTCTCGGGAAATTTTGCAACTGACTGAAGAAGGAAAACTAAAAG
CAGAAGAAGGTAAAGTGTACTTACCTAGTCTCTATTTTTCAGAGCAAGGTGTTGTTACAAATATCCAAAGGGTGCTGGAA
CAGACCCAATATGCCGAACAGTTTCCAGAGTCGGAGTTTTTGCTGGCATTAGGTGAACTAGAAGACAGATTGAAGGTTCA
GTATGCTCCTTCGCAAAAAGAGGCGATTCAGCAAGCATTAATGACTCCGATGCTACTTTTGACAGGAGGACCTGGTACAG
GTAAAACGACCGTTATTAAAGGAATTGTTGAACTGTACGCGGATCTTCATGGTTGTTCTTTGGAACCTAATGATTACAGC
AAGGAAGATCCATTTCCCATTATGCTTGTGGCCCCAACAGGCCGTGCTGCCAAGCGAATGAGTGAAGCAACTGGGCTGCC
TTCTGTGACCATCCATAGGCTACTCGGCTGGAACGGTTCGGAAGGGTTTCAACATGACGAAGAAAATCCCATCCCAGGGA
AACTTCTGATTGTGGATGAAGTGTCAATGGTGGATATTTGGCTTGCCAATCAATTATTTAAATCTCTTCCACAAGACGTC
CAGGTTGTTTTAGTAGGGGATGAGGATCAGCTTCCTTCCGTAGGTCCTGGTCAGGTGTTAAAAGATTTACTCGCGTCCAA
AGTGATACCTACTGTTCAGCTGACAGATATCTACAGACAAGCAGATGGATCGTCTATCATCGAGCTTGCGCATGATATGA
AAGACGGTCTAGTGCCAGCAGACATTTCATCTGGACAGAAAGACCGATCTTTTATAAAATGTGGCCAAACGCAAATATTG
GATGTAGTAAAAAAGGTGTGTGCAAATGCGCAAAGCAAAGGGTATTCAGCACGTGATATTCAAGTGCTTGCTCCGATGTA
TAGGGGAACAGCTGGAATAGACAAACTAAATGAAATGCTTCAAGAACTTTTTAATCCTAAAAGTGACCAAAGAAGAGAAC
TGAGCTTCGGCAATGTCGTCTACCGAACAGGTGATAAAGTCCTGCAGCTTGTCAATCAACCGGAAAGTCATGTTTTCAAT
GGTGACATCGGTGAAGTTGTCTCCATCTTTTATGCGAAAGAAAATACCGAAAAACAGGATATGGTGATTGTATCCTTTGA
TGGCAATGAGGTAACTTATACCAAGCAGGATCTTGGGCAGATAACCCACGCCTACTGCTGTTCCATACATAAGTCTCAAG
GAAGTGAGTTCCCTATTGTGGTATTACCCGTAGTGAAAAGTTATTACAGGATGTTACGAAGGAATCTACTTTACACTGCT
GTGACACGTGCCAAACGTTTTTTAATTCTTTGCGGCGAAGAAGAAGCATTAAAACTCGGAGTGCAGCGAGCGGATGAAAT
GGCAAGGCAAACATCATTGAAAGAAAGGCTTCAAATAAAACAGTCCGGAACGTTGCCAGACGAAGAAGTCATGGATCCTG
TCCTCCAAGAAGTCCCTTTCTGGAAAGACGCCAGCATCGGCATGGAAAATATAAGTCCATACGATTTTATGGATGAAGAA
TAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (596-666)

• AAA domain (AAA_30) (348-556)

• Helix-hairpin-helix containing domain (HHH_RecD2) (161-252)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (683-731)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	63.033	99.75	0.629