Detailed information NTG0061596

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: EKM74_RS01565
• Genome accession: NZ_AP019306
• Coordinates: 300581..301855 (+)
• Length: 424 a.a.
• NCBI ID: WP_125571245.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain TUM9463
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 295581..306855

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EKM74_RS01535	-	295836..296978 (-)	1143	WP_000409157.1	cysteine desulfurase family protein	-
EKM74_RS01540	-	297136..298095 (-)	960	WP_002303350.1	IS30 family transposase	-
EKM74_RS01545	-	298356..299369 (+)	1014	WP_000985878.1	LLM class flavin-dependent oxidoreductase	-
EKM74_RS01550	-	299606..299752 (-)	147	WP_000009238.1	SAS049 family protein	-
EKM74_RS01555	-	299792..299974 (-)	183	WP_000752909.1	CsbD family protein	-
EKM74_RS01560	cymR	300074..300496 (-)	423	WP_000704122.1	cysteine metabolism transcriptional regulator CymR	-
EKM74_RS01565	rarA	300581..301855 (+)	1275	WP_125571245.1	replication-associated recombination protein A	Machinery gene
EKM74_RS01570	-	302016..302789 (-)	774	WP_000682646.1	tRNA threonylcarbamoyladenosine dehydratase	-
EKM74_RS01575	-	302789..302917 (-)	129	WP_001790559.1	hypothetical protein	-
EKM74_RS01585	aspS	303250..305016 (-)	1767	WP_000044799.1	aspartate--tRNA ligase	-
EKM74_RS01590	hisS	305032..306294 (-)	1263	WP_000590826.1	histidine--tRNA ligase	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47252.82 Da
• Isoelectric Point: 8.3526

>NTDB_id=61596 EKM74_RS01565 WP_125571245.1 300581..301855(+) (rarA) [Staphylococcus aureus strain TUM9463]
MSTEPLASRMRPKNIDEIISQQHLVGPKSIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDDENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP

Nucleotide

• Length: 1275 bp

>NTDB_id=61596 EKM74_RS01565 WP_125571245.1 300581..301855(+) (rarA) [Staphylococcus aureus strain TUM9463]
GTGAGTACAGAACCATTAGCATCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACATTTAGTTGGACC
AAAAAGCATTATCAGAAGAATGGTTGACACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACGCAATATAAATTCAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTGTTAGATGAAATACATCGACTAGATAAAGC
TAAACAAGACTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTGATTGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTCGAGTTATATCCTTTAAATGACGAAGATGTGCGCCAAGCGTTA
ACTCGTGCAATAGAAGATGATGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCCATGACCTACTTTTC
TACACAAAGCCAAGGTGATGTTCGTAGTGCGTTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAAGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGTTTACAAAAAGGTGCATTTGTAAGTGATAAGGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATTCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGTCAAATTCCAAATCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTTAAAAACAAAATTTATTAT
GAACCAAAAACGACATCTAAAAGTGAACAACAACTCAAAGAAATATATAACAACTTACTTAAACAAAGGCCGTAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (175-253)

• MgsA AAA+ ATPase C terminal (MgsA_C) (254-418)

• ATPase family associated with various cellular activities (AAA) (AAA) (43-145)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	69.048	99.057	0.684