Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   NQZ90_RS01095 Genome accession   NZ_CP102148
Coordinates   207526..209859 (+) Length   777 a.a.
NCBI ID   WP_024389716.1    Uniprot ID   -
Organism   Streptococcus suis strain DNC15     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 202526..214859
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ90_RS01075 (NQZ90_01075) treP 203176..205170 (-) 1995 WP_257110288.1 PTS system trehalose-specific EIIBC component -
  NQZ90_RS01080 (NQZ90_01080) treR 205405..206118 (+) 714 WP_012774930.1 trehalose operon repressor Regulator
  NQZ90_RS01085 (NQZ90_01085) - 206176..206487 (+) 312 WP_002935948.1 hypothetical protein -
  NQZ90_RS01090 (NQZ90_01090) - 206484..207032 (+) 549 WP_002935945.1 CvpA family protein -
  NQZ90_RS01095 (NQZ90_01095) mutS/mutS2 207526..209859 (+) 2334 WP_024389716.1 endonuclease MutS2 Machinery gene
  NQZ90_RS01100 (NQZ90_01100) - 210025..210405 (+) 381 WP_024414342.1 DUF1310 family protein -
  NQZ90_RS10720 - 210412..211202 (+) 791 Protein_184 esterase/lipase family protein -
  NQZ90_RS01110 (NQZ90_01110) - 211288..211680 (+) 393 WP_014637383.1 DUF1310 family protein -
  NQZ90_RS01115 (NQZ90_01115) - 211673..212914 (+) 1242 WP_024414343.1 Mbeg1-like protein -
  NQZ90_RS01120 (NQZ90_01120) - 212893..213279 (+) 387 WP_002935925.1 hypothetical protein -
  NQZ90_RS01125 (NQZ90_01125) - 213292..213612 (+) 321 WP_002935924.1 hypothetical protein -
  NQZ90_RS01130 (NQZ90_01130) trxA 213852..214166 (+) 315 WP_024386049.1 thioredoxin -

Sequence

Protein


Download         Length: 777 a.a.        Molecular weight: 87638.41 Da        Isoelectric Point: 6.8323

>NTDB_id=615552 NQZ90_RS01095 WP_024389716.1 207526..209859(+) (mutS/mutS2) [Streptococcus suis strain DNC15]
MNNKIIETLEFHKVRQKIEPYLLTEQGFEELRQLEPMVEVHRIQQAFDELTDIAQIFVENPYFSLAATSDISPAMRRLEL
DTDLNIAELLAVKKVLEVSKSLLDFYGNLENVSLSQLDKLFEKIELFPHLQGSLQSINDAGFVEDFASEKLARIRRKIRE
AEDQVRQVMQDILKTKGDMLSDSILASRNGRNVLPVKNTYRNKIAGVVHDISASGSTVYIEPRAVVTLNEEISHLRAEER
HELNRILQELSDMLRPHSGVIRNNAWLIGHIDFVRAKHLFAREHQAVVPKLSEKQDIALLNVRHPLIAKPVPNDLYFGSQ
LTAIVITGPNTGGKTIMLKTLGLTHLMAQSGLPILADKGSRVAIFKEIFADIGDEQSIEQSLSTFSSHMTHTVEILRAAD
QDSLILFDELGAGTDPQEGASLAMAILDDLRLRGIKTMATTHYPELKAYGIETSGIENASMEFDSNSLRPTYKFMQGVPG
RSNAFEIARRLGLSDIIIQSAQSWTDTDSDVNRIIEKLESQTVESRQRLDKIRDVEQENYKMNRALRKLYDELNRERENE
LNKARLEAKEIVDMALAESEDILKNLHAAASIKPHQIIEAKAELKKLAPEVVDLSKNKVLRKAKIQREAKVGDDIIVTAY
GQRGTLTNQLKDGRWEAQVGLIKMTLAKDEFELVKAEKAEKPKKRQVHTVKRANVRGPKARLDLRGKRYEEAMMELDEFI
DQALLNNLAQVDIVHGIGTGVIREGVTKYLRRNKQVKEFGYAPQNAGGSGCTIVTFK

Nucleotide


Download         Length: 2334 bp        

>NTDB_id=615552 NQZ90_RS01095 WP_024389716.1 207526..209859(+) (mutS/mutS2) [Streptococcus suis strain DNC15]
ATGAATAATAAAATTATTGAAACCCTTGAATTTCACAAGGTAAGACAAAAAATTGAGCCCTATCTCTTGACGGAACAGGG
CTTTGAAGAATTACGACAGTTGGAGCCCATGGTGGAAGTCCATCGTATCCAACAGGCCTTCGACGAGTTGACAGACATAG
CGCAGATTTTTGTGGAAAATCCCTATTTCAGTCTGGCTGCTACTAGTGACATCAGTCCAGCCATGCGTCGTTTGGAATTG
GATACAGACCTCAATATCGCTGAATTATTAGCTGTTAAAAAGGTCTTGGAAGTTTCTAAATCTCTCTTGGATTTTTATGG
AAATCTGGAAAATGTCAGTCTTAGCCAGCTGGATAAACTCTTTGAGAAGATTGAGCTTTTTCCACATTTACAGGGCTCCC
TCCAGTCCATCAATGATGCTGGTTTTGTAGAGGATTTTGCCTCAGAAAAGCTGGCTCGTATTCGAAGAAAAATCCGTGAA
GCTGAAGATCAAGTTCGTCAGGTCATGCAGGATATTTTGAAGACCAAGGGCGACATGCTATCCGATAGTATTTTGGCAAG
CCGTAATGGACGCAATGTCCTTCCTGTTAAAAATACCTATCGCAATAAGATTGCAGGGGTTGTCCATGATATTTCTGCTT
CGGGTTCGACCGTTTATATTGAGCCGCGGGCAGTGGTGACCTTGAACGAAGAAATCAGTCACCTACGTGCAGAAGAACGC
CATGAGCTCAACCGTATCCTGCAGGAATTATCGGATATGCTCCGTCCGCATAGTGGCGTGATTCGTAACAATGCCTGGCT
TATCGGGCATATTGATTTCGTCCGTGCTAAGCATCTCTTTGCGCGTGAACATCAAGCAGTTGTACCCAAACTATCTGAGA
AGCAGGATATTGCTCTTCTCAACGTTCGGCATCCGCTCATTGCTAAGCCTGTACCAAATGACCTTTATTTCGGTAGTCAG
TTGACGGCTATCGTGATAACAGGTCCCAACACAGGTGGTAAGACTATCATGCTCAAGACCTTGGGTTTGACCCATCTGAT
GGCTCAGTCTGGTTTGCCTATCTTGGCTGATAAGGGCAGTCGGGTAGCTATCTTCAAAGAAATTTTTGCGGATATTGGTG
ATGAACAGTCGATTGAGCAGAGTTTATCAACCTTCTCCAGTCACATGACCCACACGGTGGAAATTTTAAGAGCAGCTGAT
CAAGATTCTCTCATTCTATTTGACGAGTTGGGAGCTGGGACAGATCCGCAAGAGGGTGCGTCTTTGGCTATGGCCATCTT
AGATGACCTTCGTTTGCGGGGGATCAAGACCATGGCGACCACCCACTACCCTGAGCTTAAGGCCTACGGGATAGAAACCT
CTGGTATTGAAAATGCCAGCATGGAGTTTGATAGCAATAGCCTGCGTCCGACCTATAAGTTTATGCAGGGTGTTCCTGGT
CGCTCCAATGCCTTTGAAATTGCCCGCCGTCTTGGTCTATCTGACATCATTATCCAGTCGGCTCAGTCTTGGACCGATAC
AGATAGCGATGTGAACCGCATTATCGAGAAATTGGAAAGTCAGACGGTTGAAAGTCGTCAGCGTCTGGATAAGATTCGTG
ATGTGGAGCAAGAAAATTACAAGATGAACCGAGCCCTCCGCAAGCTCTATGACGAGCTCAATCGTGAGCGGGAAAATGAG
CTCAACAAGGCACGCTTGGAAGCCAAGGAAATTGTAGATATGGCATTGGCAGAAAGCGAGGATATTCTCAAAAATCTCCA
TGCTGCAGCTAGTATTAAGCCCCATCAGATTATCGAAGCCAAGGCAGAGCTGAAAAAGTTGGCGCCTGAAGTGGTGGATC
TGTCTAAAAACAAGGTTCTGAGGAAAGCTAAAATTCAGAGGGAAGCCAAGGTGGGCGATGACATTATCGTTACAGCTTAT
GGACAACGCGGGACCTTGACCAATCAGCTCAAGGACGGACGTTGGGAAGCTCAGGTTGGCTTGATTAAGATGACCTTGGC
CAAAGATGAGTTTGAGTTAGTCAAGGCAGAAAAGGCAGAGAAGCCTAAGAAACGCCAGGTTCACACAGTCAAACGTGCCA
ATGTACGAGGACCAAAAGCCCGCTTAGATCTCCGTGGCAAACGCTACGAAGAGGCTATGATGGAACTGGATGAATTTATC
GACCAGGCCCTTCTCAATAACCTAGCACAAGTAGACATTGTCCACGGTATAGGTACAGGTGTCATCCGAGAAGGGGTGAC
CAAGTACCTACGCCGAAACAAGCAGGTCAAGGAGTTCGGCTATGCCCCACAAAATGCAGGTGGATCAGGCTGTACTATTG
TGACGTTTAAATAA

Domains

Predicted by InterProScan.

MutS2 and Smr-associated SH3 domain (MSSS)

(631-670)

MutS domain V (MutS_V)

(324-504)

Smr domain (Smr)

(702-777)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.52

100

0.403