Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   NQZ93_RS01210 Genome accession   NZ_CP102141
Coordinates   224805..227138 (+) Length   777 a.a.
NCBI ID   WP_024382076.1    Uniprot ID   -
Organism   Streptococcus suis strain DNR48     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 219805..232138
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ93_RS01190 (NQZ93_01190) treP 220788..222782 (-) 1995 WP_024382077.1 PTS system trehalose-specific EIIBC component -
  NQZ93_RS01195 (NQZ93_01195) treR 223016..223729 (+) 714 WP_012774930.1 trehalose operon repressor Regulator
  NQZ93_RS01200 (NQZ93_01200) - 223787..224098 (+) 312 WP_002935948.1 hypothetical protein -
  NQZ93_RS01205 (NQZ93_01205) - 224095..224643 (+) 549 WP_002935945.1 CvpA family protein -
  NQZ93_RS01210 (NQZ93_01210) mutS/mutS2 224805..227138 (+) 2334 WP_024382076.1 endonuclease MutS2 Machinery gene
  NQZ93_RS01215 (NQZ93_01215) - 227162..227874 (+) 713 Protein_204 GNAT family N-acetyltransferase -
  NQZ93_RS01220 (NQZ93_01220) trxA 228394..228708 (+) 315 WP_024382075.1 thioredoxin -
  NQZ93_RS11630 - 228819..228869 (-) 51 WP_353735889.1 hypothetical protein -
  NQZ93_RS01225 (NQZ93_01225) - 228859..230388 (+) 1530 WP_257115312.1 AMP-binding protein -
  NQZ93_RS01230 (NQZ93_01230) msrB 230428..231366 (+) 939 WP_024390717.1 peptide-methionine (R)-S-oxide reductase MsrB -
  NQZ93_RS01235 (NQZ93_01235) - 231497..232129 (+) 633 WP_228380938.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 777 a.a.        Molecular weight: 87523.23 Da        Isoelectric Point: 6.8322

>NTDB_id=615258 NQZ93_RS01210 WP_024382076.1 224805..227138(+) (mutS/mutS2) [Streptococcus suis strain DNR48]
MNNKIIETLEFHKVRQKIEPYLLTEQGFEELRQLEPMVEVHRIQQAFDELTDIAQIFVENPYFSLAATSDIGPAMRRLEL
DTDLNIAELLAVKKVLEVSKSLLDFYGNLENVSLSQLDKLFEKIELFPHLQGSLQSINDAGFVEDFASEKLARTRRKIRE
AEDQVRQVMQDILKNKGDMLSDSILASRNGRNVLPVKNTYRNKIAGVVHDISASGSTVYIEPRAVVTLNEEISHLRAEER
HELNRILQELSDMLRPHSGVIRNNAWLIGHIDFVRAKHLFAREHQAVVPKLSEKQDIALLNVRHPLIAKPVPNDLYFGSQ
LTAIVITGPNTGGKTIMLKTLGLTHLMAQSGLPILADKGSRVAIFKEIFADIGDEQSIEQSLSTFSSHMTHTVEILRAAD
QDSLILFDELGAGTDPQEGASLAMAILDDLRLRGIKTMATTHYPELKAYGIETSGIENASMEFDSNSLRPTYKFMQGVPG
RSNAFEIARRLGLSDIIIQSAQSWTDTDSDVNRIIEKLESQTVESRQRLDKIRDVEQENYKMNRALRKLYDELNRERENE
LNKARLEAKEIVDMALAESEDILKNLHAAASLKPHQIIEAKAELKKLAPEVVDLSKNKVLKKAKIQREAKVGDDIIVTAY
GQRGTLTNQLKGGRWEAQVGLIKMTLAKDEFELVKAEKAEQPKKRQVHTVKRANVRGPKARLDLRGKRYEEAMMELDEFI
DQALLNNLAQVDIVHGIGTGVIREGVTKYLRRNKQVKEFGYAPQNAGGSGCTIVTFK

Nucleotide


Download         Length: 2334 bp        

>NTDB_id=615258 NQZ93_RS01210 WP_024382076.1 224805..227138(+) (mutS/mutS2) [Streptococcus suis strain DNR48]
ATGAATAATAAAATTATTGAAACCCTTGAATTTCACAAGGTAAGACAAAAAATTGAGCCCTATCTCTTGACGGAACAGGG
CTTTGAAGAATTACGACAGTTGGAGCCCATGGTGGAAGTCCACCGTATCCAACAGGCCTTCGACGAGTTGACAGACATAG
CGCAGATTTTTGTGGAAAATCCCTATTTCAGTCTGGCTGCTACTAGTGACATCGGTCCAGCCATGCGTCGTTTGGAATTG
GATACAGACCTCAATATCGCTGAATTATTAGCTGTTAAAAAGGTCTTGGAAGTTTCTAAATCTCTCTTGGATTTTTATGG
AAATCTGGAAAATGTCAGTCTTAGCCAGCTGGATAAACTCTTTGAGAAAATCGAGCTCTTTCCCCACTTACAAGGTTCGC
TCCAGTCTATCAATGATGCAGGCTTTGTCGAGGATTTTGCTTCTGAAAAGCTAGCTCGTACCCGCAGGAAGATTCGTGAA
GCTGAGGACCAGGTTCGTCAGGTCATGCAGGATATCTTGAAGAACAAGGGGGATATGCTGTCCGACAGCATCTTGGCTAG
TCGTAATGGGCGCAATGTCCTTCCTGTCAAAAATACCTATCGCAATAAGATTGCGGGTGTAGTCCATGATATCTCCGCCT
CAGGTTCGACCGTTTATATTGAGCCGCGGGCAGTGGTGACCTTGAACGAAGAAATCAGTCACCTACGTGCAGAAGAACGC
CATGAGCTCAACCGTATCTTGCAGGAATTGTCGGATATGCTCCGTCCGCATAGTGGCGTGATTCGTAACAATGCCTGGCT
TATCGGGCATATTGATTTCGTCCGTGCTAAGCATCTCTTTGCGCGTGAACATCAAGCAGTTGTACCCAAACTATCTGAGA
AGCAGGATATTGCTCTTCTCAACGTTCGACATCCGCTCATTGCTAAGCCTGTACCAAATGACCTTTATTTCGGTAGTCAG
TTGACGGCTATCGTGATAACAGGTCCCAACACAGGTGGTAAAACCATCATGCTTAAGACCTTGGGATTGACCCATCTGAT
GGCCCAGTCTGGTTTGCCTATTTTGGCTGATAAGGGCAGTCGGGTAGCTATCTTCAAAGAAATTTTTGCGGATATTGGTG
ATGAACAGTCGATTGAGCAGAGTTTATCAACCTTCTCCAGTCACATGACCCACACGGTGGAAATTTTAAGAGCAGCTGAT
CAAGATTCTCTCATTCTATTTGACGAGTTGGGAGCTGGGACAGATCCGCAAGAGGGTGCGTCTTTGGCTATGGCCATCTT
AGATGACCTTCGTTTGCGGGGGATCAAGACCATGGCGACCACCCACTACCCTGAGCTTAAGGCCTACGGGATAGAAACCT
CTGGTATTGAAAATGCCAGCATGGAATTTGATAGCAATAGCCTGCGTCCGACCTATAAGTTTATGCAGGGTGTTCCTGGT
CGCTCCAATGCCTTTGAAATTGCCCGCCGTCTTGGTCTATCTGATATTATTATCCAGTCAGCCCAATCTTGGACGGATAC
AGATAGCGATGTGAACCGCATTATCGAGAAATTGGAAAGTCAGACGGTTGAAAGTCGTCAGCGTCTGGATAAGATTCGTG
ATGTGGAGCAAGAAAATTACAAGATGAACCGAGCCCTCCGCAAGCTCTATGACGAGCTCAATCGTGAGCGAGAAAATGAG
CTCAACAAGGCACGCTTGGAGGCCAAGGAAATTGTAGATATGGCATTGGCAGAAAGCGAGGATATTCTCAAAAATCTGCA
TGCTGCAGCCAGTCTTAAGCCTCACCAGATTATCGAAGCCAAGGCAGAGCTGAAAAAGTTGGCGCCTGAAGTGGTGGATC
TGTCTAAAAACAAGGTTCTGAAGAAAGCTAAAATTCAGAGGGAAGCCAAGGTGGGTGATGACATTATCGTTACAGCTTAT
GGACAACGTGGGACCTTGACCAATCAGCTCAAGGGCGGGCGTTGGGAAGCTCAGGTTGGCTTGATTAAGATGACCTTGGC
AAAAGATGAGTTTGAGTTAGTCAAGGCGGAAAAGGCAGAGCAGCCTAAGAAACGCCAGGTTCACACAGTCAAACGTGCCA
ATGTACGAGGACCAAAAGCCCGCTTAGATCTCCGTGGCAAACGCTACGAAGAGGCTATGATGGAACTGGATGAATTTATC
GATCAGGCCCTTCTCAATAACCTAGCCCAAGTCGATATTGTCCACGGTATTGGTACTGGAGTTATCCGAGAAGGGGTGAC
CAAGTACCTACGCCGAAACAAGCAGGTCAAGGAGTTCGGCTATGCCCCACAAAATGCAGGTGGATCAGGCTGTACTATTG
TGACGTTTAAATAG

Domains

Predicted by InterProScan.

MutS domain V (MutS_V)

(324-504)

MutS2 and Smr-associated SH3 domain (MSSS)

(631-670)

Smr domain (Smr)

(702-777)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.646

100

0.404