Detailed information
Bioinformatically predicted
Overview
| Name | comX/sigX | Type | Regulator |
| Locus tag | LIO31_RS00385 | Genome accession | NZ_CP085086 |
| Coordinates | 67869..68135 (+) | Length | 88 a.a. |
| NCBI ID | WP_014635810.1 | Uniprot ID | A0A2K1SXG9 |
| Organism | Streptococcus suis strain Ssuis_MA6 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 62869..73135
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LIO31_RS00350 | - | 62877..64048 (+) | 1172 | Protein_50 | competence/damage-inducible protein A | - |
| LIO31_RS00355 | recA | 64100..65248 (+) | 1149 | WP_023369045.1 | recombinase RecA | Machinery gene |
| LIO31_RS00360 | spx | 65484..65882 (+) | 399 | WP_002939362.1 | transcriptional regulator Spx | - |
| LIO31_RS00365 | - | 65982..66248 (+) | 267 | WP_002939360.1 | IreB family regulatory phosphoprotein | - |
| LIO31_RS00370 | ruvX | 66248..66667 (+) | 420 | WP_002939356.1 | Holliday junction resolvase RuvX | - |
| LIO31_RS00375 | - | 66679..67011 (+) | 333 | WP_074389614.1 | DUF1292 domain-containing protein | - |
| LIO31_RS00380 | - | 67218..67796 (+) | 579 | WP_012774895.1 | nucleotidyltransferase family protein | - |
| LIO31_RS00385 | comX/sigX | 67869..68135 (+) | 267 | WP_014635810.1 | hypothetical protein | Regulator |
| LIO31_RS00390 | rpsJ | 68458..68766 (+) | 309 | WP_014735259.1 | 30S ribosomal protein S10 | - |
| LIO31_RS00395 | rplC | 68903..69529 (+) | 627 | WP_011921686.1 | 50S ribosomal protein L3 | - |
| LIO31_RS00400 | rplD | 69554..70177 (+) | 624 | WP_004195490.1 | 50S ribosomal protein L4 | - |
| LIO31_RS00405 | - | 70177..70476 (+) | 300 | WP_004195491.1 | 50S ribosomal protein L23 | - |
| LIO31_RS00410 | rplB | 70494..71327 (+) | 834 | WP_002936663.1 | 50S ribosomal protein L2 | - |
| LIO31_RS00415 | rpsS | 71578..71859 (+) | 282 | WP_000533766.1 | 30S ribosomal protein S19 | - |
| LIO31_RS00420 | rplV | 71877..72221 (+) | 345 | WP_002936662.1 | 50S ribosomal protein L22 | - |
| LIO31_RS00425 | rpsC | 72234..72887 (+) | 654 | WP_002936661.1 | 30S ribosomal protein S3 | - |
Sequence
Protein
Download Length: 88 a.a. Molecular weight: 10670.50 Da Isoelectric Point: 9.1949
>NTDB_id=615197 LIO31_RS00385 WP_014635810.1 67869..68135(+) (comX/sigX) [Streptococcus suis strain Ssuis_MA6]
MEFETVCLKVRNLGRLYCYFKVKFRTHIEAIIRKQESQKCKFDRLLHEDIHSLIQSPSLGNDELLMLWGLLRDYRKNLIN
DRLENMKN
MEFETVCLKVRNLGRLYCYFKVKFRTHIEAIIRKQESQKCKFDRLLHEDIHSLIQSPSLGNDELLMLWGLLRDYRKNLIN
DRLENMKN
Nucleotide
Download Length: 267 bp
>NTDB_id=615197 LIO31_RS00385 WP_014635810.1 67869..68135(+) (comX/sigX) [Streptococcus suis strain Ssuis_MA6]
ATGGAATTTGAAACGGTTTGTTTGAAGGTTAGAAACTTAGGTAGGCTATATTGCTACTTCAAAGTTAAATTTAGAACCCA
TATCGAGGCTATAATTCGTAAACAGGAAAGTCAAAAATGTAAATTTGATCGTCTCCTCCATGAAGATATTCATAGTTTGA
TTCAATCACCGAGCTTGGGTAATGATGAGTTGCTGATGTTATGGGGTCTCCTGAGAGATTATCGAAAAAATTTAATCAAT
GACCGACTTGAAAATATGAAAAATTGA
ATGGAATTTGAAACGGTTTGTTTGAAGGTTAGAAACTTAGGTAGGCTATATTGCTACTTCAAAGTTAAATTTAGAACCCA
TATCGAGGCTATAATTCGTAAACAGGAAAGTCAAAAATGTAAATTTGATCGTCTCCTCCATGAAGATATTCATAGTTTGA
TTCAATCACCGAGCTTGGGTAATGATGAGTTGCTGATGTTATGGGGTCTCCTGAGAGATTATCGAAAAAATTTAATCAAT
GACCGACTTGAAAATATGAAAAATTGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comX/sigX | Streptococcus suis D9 |
72.603 |
82.955 |
0.602 |
| comX/sigX | Streptococcus suis isolate S10 |
71.233 |
82.955 |
0.591 |
| comX/sigX | Streptococcus suis P1/7 |
71.233 |
82.955 |
0.591 |