Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   NQZ95_RS07495 Genome accession   NZ_CP102138
Coordinates   1503768..1504502 (-) Length   244 a.a.
NCBI ID   WP_002938699.1    Uniprot ID   -
Organism   Streptococcus suis strain M102942_S11     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1498768..1509502
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ95_RS07465 (NQZ95_07465) - 1498913..1499704 (-) 792 WP_024394467.1 class C sortase -
  NQZ95_RS07470 (NQZ95_07470) - 1499672..1500061 (+) 390 Protein_1443 transposase -
  NQZ95_RS07475 (NQZ95_07475) - 1500062..1500373 (-) 312 WP_225533365.1 hypothetical protein -
  NQZ95_RS07480 (NQZ95_07480) lepB 1500467..1501069 (-) 603 WP_032504114.1 signal peptidase I -
  NQZ95_RS07485 (NQZ95_07485) - 1501059..1501352 (-) 294 WP_256788959.1 DNA repair protein -
  NQZ95_RS07490 (NQZ95_07490) - 1502790..1503638 (-) 849 WP_002938697.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -
  NQZ95_RS07495 (NQZ95_07495) amiE 1503768..1504502 (-) 735 WP_002938699.1 amino acid ABC transporter ATP-binding protein Regulator
  NQZ95_RS07500 (NQZ95_07500) - 1504495..1505184 (-) 690 WP_002938702.1 amino acid ABC transporter permease -
  NQZ95_RS07505 (NQZ95_07505) - 1505310..1505540 (-) 231 WP_002938704.1 DUF1797 family protein -
  NQZ95_RS07510 (NQZ95_07510) clpE 1505764..1507992 (+) 2229 WP_024409218.1 ATP-dependent Clp protease ATP-binding subunit Regulator
  NQZ95_RS07515 (NQZ95_07515) - 1508178..1508639 (+) 462 WP_002938708.1 NUDIX hydrolase -
  NQZ95_RS07520 (NQZ95_07520) - 1508694..1509002 (+) 309 WP_002938710.1 DUF1827 family protein -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 26895.13 Da        Isoelectric Point: 4.7252

>NTDB_id=615108 NQZ95_RS07495 WP_002938699.1 1503768..1504502(-) (amiE) [Streptococcus suis strain M102942_S11]
MSNAIISIKDLHKYFGKNEVLKGIDLDIQQGQVVVIIGPSGSGKSTFLRTMNLLEVPTKGTVTFEGVDITDKSNDIFKMR
EKMGMVFQQFNLFPNMTVLDNITLSPIKTKGIAKDEAEKKAKELLEKVGLPDKANAYPQSLSGGQQQRIAIARGLAMDPD
VLLFDEPTSALDPEMVGEVLAVMQDLAKSGMTMVIVTHEMGFAREVADRVIFMDGGIIVEDGTPEEVFEHTKEERTKDFL
SKVL

Nucleotide


Download         Length: 735 bp        

>NTDB_id=615108 NQZ95_RS07495 WP_002938699.1 1503768..1504502(-) (amiE) [Streptococcus suis strain M102942_S11]
ATGTCTAATGCGATTATTTCTATCAAGGATTTACATAAGTACTTCGGAAAGAATGAGGTTCTAAAAGGAATTGATTTAGA
TATTCAACAAGGTCAGGTTGTCGTTATTATCGGTCCATCAGGGTCAGGGAAATCGACTTTCTTACGTACAATGAACCTCT
TAGAAGTGCCAACCAAGGGAACTGTTACATTTGAAGGTGTTGATATTACTGACAAGTCAAATGATATTTTCAAGATGCGT
GAAAAGATGGGAATGGTTTTTCAACAGTTCAACCTTTTTCCAAATATGACGGTATTAGATAACATTACTTTATCACCTAT
TAAGACAAAGGGAATTGCAAAGGATGAGGCTGAGAAGAAGGCTAAGGAATTACTTGAAAAGGTAGGATTGCCAGATAAGG
CAAATGCCTATCCACAAAGCCTTTCAGGTGGTCAGCAACAACGGATCGCTATTGCACGTGGTCTGGCCATGGACCCAGAT
GTCCTGCTTTTTGATGAACCGACCTCTGCACTAGACCCTGAAATGGTTGGTGAAGTTCTTGCTGTAATGCAGGATTTGGC
CAAGTCGGGGATGACCATGGTTATCGTGACTCATGAGATGGGATTTGCGCGTGAGGTAGCTGACAGGGTTATCTTTATGG
ATGGCGGTATCATCGTGGAGGATGGAACGCCTGAAGAAGTCTTTGAACATACCAAGGAAGAACGGACCAAGGATTTCTTG
TCTAAGGTCTTGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(21-169)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

34.496

100

0.365
  amiE Streptococcus thermophilus LMG 18311

34.496

100

0.365
  amiE Streptococcus thermophilus LMD-9

34.496

100

0.365