Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   NQZ97_RS01315 Genome accession   NZ_CP102136
Coordinates   262652..264985 (+) Length   777 a.a.
NCBI ID   WP_170238120.1    Uniprot ID   -
Organism   Streptococcus suis strain M105052_S26     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 257652..269985
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ97_RS01295 (NQZ97_01295) - 259398..260687 (-) 1290 WP_061512318.1 IS4 family transposase -
  NQZ97_RS01300 (NQZ97_01300) treR 260863..261576 (+) 714 WP_104929945.1 trehalose operon repressor Regulator
  NQZ97_RS01305 (NQZ97_01305) - 261634..261945 (+) 312 WP_002935948.1 hypothetical protein -
  NQZ97_RS01310 (NQZ97_01310) - 261942..262490 (+) 549 WP_170238119.1 CvpA family protein -
  NQZ97_RS01315 (NQZ97_01315) mutS/mutS2 262652..264985 (+) 2334 WP_170238120.1 endonuclease MutS2 Machinery gene
  NQZ97_RS01320 (NQZ97_01320) - 265009..265653 (+) 645 WP_170238121.1 GNAT family N-acetyltransferase -
  NQZ97_RS01325 (NQZ97_01325) trxA 265968..266282 (+) 315 WP_012775426.1 thioredoxin -
  NQZ97_RS01330 (NQZ97_01330) - 266416..267945 (+) 1530 WP_170238122.1 AMP-binding protein -
  NQZ97_RS01335 (NQZ97_01335) msrB 267985..268923 (+) 939 WP_170238123.1 peptide-methionine (R)-S-oxide reductase MsrB -

Sequence

Protein


Download         Length: 777 a.a.        Molecular weight: 87600.33 Da        Isoelectric Point: 6.7386

>NTDB_id=614867 NQZ97_RS01315 WP_170238120.1 262652..264985(+) (mutS/mutS2) [Streptococcus suis strain M105052_S26]
MNNKIIETLEFHKVRQKIEPYLLTEQGFEELRQLEPMVEVHRIQQAFDELTDIAQIFVENPYFSMSATSDIGPAMRRLEL
DTDLNIAELLAVKKVLEVSKSLLDFYGNLENVSLSQLDKLFEKIELFPHLQGSLQSINDAGFVEDFASEKLARIRRKIRE
AEDQVRQVMQDILKTKGDMLSDSILASRNGRNVLPVKNTYRNKIAGVVHDISASGSTVYIEPRAVVTLNEEISHLRAEER
HELNRILQELSDMLRPHSGVIRNNAWLIGHIDFVRAKHLFAREHQAVVPKLSEKQDIALLNVRHPLIAKPVPNDLYFGSQ
LTAIVITGPNTGGKTIMLKTLGLTHLMAQSGLPILADKGSRVAIFREIFADIGDEQSIEQSLSTFSSHMTHTVQILAEAD
QDSLILFDELGAGTDPQEGASLAMAILDDLRLRGIKTMATTHYPELKAYGIETSGIENASMEFDSNSLRPTYKFMQGVPG
RSNAFEIARRLGLSDIIIQSAQSWTDTDSDVNRIIEKLESQTVESRQRLDKIRDVEQENYKMNRALRKLYDELNRERENE
LNKARLEAKEIVDMALAESEDILKNLHAAASLKPHQIIEAKAELKKLAPEVVDLSKNKVLKKAKIQRAAKVGDDIIVTAY
GQRGTLTNQLKDGRWEAQVGLIKMTLTKEEFELVKAEKAEQPKKRQVHTVKRANVRGPKARLDLRGKRYEEAMMELDEFI
DQALLNNLAQVDIVHGIGTGVIREGVTKYLRRNKQVKEFGYAPQNAGGSGCTIVTFK

Nucleotide


Download         Length: 2334 bp        

>NTDB_id=614867 NQZ97_RS01315 WP_170238120.1 262652..264985(+) (mutS/mutS2) [Streptococcus suis strain M105052_S26]
ATGAATAATAAAATTATTGAAACCCTTGAATTTCACAAGGTAAGACAAAAAATTGAGCCCTATCTCTTGACGGAACAGGG
CTTTGAAGAATTGCGACAGTTGGAGCCTATGGTGGAAGTCCACCGTATCCAACAGGCCTTTGACGAGTTGACAGATATAG
CGCAGATTTTTGTGGAAAATCCCTATTTCAGCATGTCTGCTACGAGTGACATTGGTCCAGCCATGCGTCGTTTGGAATTG
GATACAGACCTCAATATCGCTGAATTATTAGCTGTTAAAAAGGTCTTGGAAGTTTCTAAATCTCTCTTGGATTTTTATGG
AAATCTGGAAAATGTCAGTCTTAGCCAGCTGGATAAACTCTTTGAGAAGATTGAGCTTTTTCCACATTTACAGGGCTCCC
TCCAGTCTATCAATGATGCTGGTTTTGTAGAGGATTTTGCCTCAGAAAAGCTGGCTCGTATCCGCCGGAAAATCCGTGAA
GCTGAAGACCAAGTTCGTCAGGTCATGCAGGATATTTTGAAGACCAAGGGGGACATGCTGTCCGATAGCATTTTGGCAAG
CCGTAATGGACGCAATGTCCTTCCTGTTAAAAATACCTATCGCAATAAGATTGCTGGGGTTGTCCATGACATTTCAGCTT
CGGGTTCGACCGTTTATATTGAGCCGCGGGCAGTGGTGACCTTGAACGAAGAAATCAGTCACCTACGTGCAGAAGAACGC
CATGAGCTCAACCGTATCTTGCAGGAATTGTCGGATATGCTCCGTCCGCATAGTGGCGTGATTCGTAACAATGCCTGGCT
TATCGGTCATATTGATTTTGTTCGTGCTAAGCATCTCTTTGCACGTGAACATCAAGCAGTTGTACCCAAACTATCTGAGA
AGCAGGATATTGCCCTTCTCAATGTTCGGCATCCGCTCATTGCTAAGCCTGTACCAAATGACCTTTATTTCGGTAGTCAG
TTGACGGCTATCGTGATAACGGGTCCCAACACGGGTGGTAAGACCATCATGCTTAAGACCTTGGGATTGACCCATCTGAT
GGCCCAGTCTGGTTTGCCTATTTTGGCTGATAAGGGCAGTCGGGTAGCTATCTTCAGAGAAATCTTTGCGGATATTGGGG
ACGAACAGTCTATTGAGCAGAGTTTATCAACCTTCTCCAGTCACATGACCCACACGGTGCAGATTTTAGCGGAGGCGGAT
CAGGATTCCCTTATCCTATTTGATGAGTTGGGAGCTGGGACCGATCCGCAGGAGGGTGCGTCTTTGGCAATGGCTATTTT
GGATGACCTTCGTCTGCGGGGGATCAAGACCATGGCGACCACCCACTACCCTGAGCTTAAGGCCTACGGGATAGAAACCT
CTGGTATTGAAAATGCCAGCATGGAGTTTGATAGCAATAGCCTGCGTCCGACCTATAAGTTTATGCAGGGTGTTCCTGGT
CGCTCCAATGCCTTTGAAATTGCCCGCCGTCTTGGTCTATCTGATATTATTATCCAGTCAGCCCAATCTTGGACGGATAC
AGATAGCGATGTGAACCGCATTATCGAGAAATTGGAAAGTCAGACGGTTGAAAGTCGTCAGCGTCTTGATAAGATTCGTG
ATGTGGAGCAAGAAAATTACAAGATGAACCGAGCCCTCCGCAAGCTCTATGACGAGCTCAATCGTGAGCGGGAAAATGAG
CTCAACAAGGCACGCTTGGAGGCCAAGGAAATTGTAGATATGGCATTGGCAGAAAGCGAGGATATTCTCAAAAATCTCCA
TGCTGCAGCTAGTCTTAAGCCTCACCAGATTATCGAAGCCAAGGCAGAGCTGAAAAAGTTGGCGCCTGAAGTGGTGGATT
TGTCTAAAAACAAGGTTTTGAAAAAAGCCAAAATCCAGCGAGCTGCCAAGGTGGGCGATGACATTATCGTTACAGCTTAT
GGACAACGTGGCACCCTGACCAATCAGCTCAAGGACGGGCGTTGGGAAGCTCAGGTTGGCTTGATTAAGATGACCTTGAC
CAAGGAGGAGTTTGAGTTAGTCAAGGCGGAAAAGGCAGAGCAGCCTAAGAAACGCCAGGTTCACACAGTCAAACGTGCCA
ATGTACGCGGACCAAAAGCCCGCTTAGATCTCCGTGGCAAACGCTACGAAGAGGCTATGATGGAGCTGGATGAATTTATC
GACCAGGCCCTGCTCAACAATCTGGCACAAGTAGACATTGTCCACGGTATTGGTACTGGAGTCATCCGAGAAGGGGTGAC
CAAGTACCTCCGTCGCAACAAGCAAGTCAAGGAGTTCGGCTATGCCCCACAAAATGCAGGTGGCTCTGGCTGTACTATTG
TGACGTTTAAATAG

Domains

Predicted by InterProScan.

MutS2 and Smr-associated SH3 domain (MSSS)

(631-669)

MutS domain V (MutS_V)

(324-504)

Smr domain (Smr)

(702-777)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.52

100

0.403