Detailed information NTG0614828

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: LG951_RS12775
• Genome accession: NZ_CP085037
• Coordinates: 2465771..2468155 (-)
• Length: 794 a.a.
• NCBI ID: WP_003216666.1
• Uniprot ID: -
• Organism: Bacillus pumilus strain BIM B-171
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2460771..2473155

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LG951_RS12740 (LG951_12740)	-	2461833..2462561 (+)	729	WP_003216774.1	amino acid ABC transporter ATP-binding protein	-
LG951_RS12745 (LG951_12745)	-	2462575..2463384 (+)	810	WP_050943676.1	transporter substrate-binding domain-containing protein	-
LG951_RS12750 (LG951_12750)	-	2463465..2464118 (+)	654	WP_003216507.1	amino acid ABC transporter permease	-
LG951_RS12755 (LG951_12755)	-	2464134..2464784 (+)	651	WP_003216394.1	amino acid ABC transporter permease	-
LG951_RS12760 (LG951_12760)	-	2464820..2464951 (-)	132	WP_003216198.1	YrzQ family protein	-
LG951_RS12765 (LG951_12765)	-	2464972..2465163 (-)	192	WP_003216308.1	hypothetical protein	-
LG951_RS12770 (LG951_12770)	-	2465177..2465695 (-)	519	WP_003216813.1	hypothetical protein	-
LG951_RS12775 (LG951_12775)	recD2	2465771..2468155 (-)	2385	WP_003216666.1	ATP-dependent RecD-like DNA helicase	Machinery gene
LG951_RS12780 (LG951_12780)	-	2468175..2468828 (-)	654	WP_003216571.1	tetratricopeptide repeat protein	-
LG951_RS12785 (LG951_12785)	mnmA	2468889..2470007 (-)	1119	WP_003216305.1	tRNA 2-thiouridine(34) synthase MnmA	-
LG951_RS12790 (LG951_12790)	-	2470103..2471245 (-)	1143	WP_226803770.1	cysteine desulfurase family protein	-
LG951_RS12795 (LG951_12795)	cymR	2471264..2471683 (-)	420	WP_034620651.1	cysteine metabolism transcriptional regulator CymR	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 89019.54 Da
• Isoelectric Point: 5.2097

>NTDB_id=614828 LG951_RS12775 WP_003216666.1 2465771..2468155(-) (recD2) [Bacillus pumilus strain BIM B-171]
MQEHPDQMKLEDEPFLKGTVQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGQLGSQTLHKIMRDPAVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPERIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNEYKVTEMDVANQIIALGEGKEMIIEDERCYHPSLFYAEQSVAKRIQKIVSQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPSDYKKDE
SFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEEQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASQAVPAVTLTDIYRQADGSSIVELAHDMKNGVLPKDITARSKDRSFIKCSVDQMKEVI
EKVVSNAAQKGYSAKDIQVLAPMYKGKAGINELNKMLQHILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLVQTEEVMDAELAALQKELPFSVHDANIGMEGITPFDFMHE

Nucleotide

• Length: 2385 bp

>NTDB_id=614828 LG951_RS12775 WP_003216666.1 2465771..2468155(-) (recD2) [Bacillus pumilus strain BIM B-171]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAGGACGAACCATTTTTAAAGGGGACAGTTCAAGCCGTTATTTTCCATAA
TGAAAGTAATTTATACTCGGTGTTAAAGGTGAAAGTCATTGAAACATCGGAAAACTTAGAGGAAAAAACAGCATCTGTCA
CAGGCTACTTCCCAGCACTTCATGAGGAAGAAACTTACACCTTCTATGGCAAAGTCACAAGTCACCCGAAATTTGGTGAA
CAGTTTCAGGCGACTCATTTTCAAAAGGAAGTACCGACAACAAAGCAAGGAATCATTCATTATCTCTCAAGTGATTTATT
CGAAGGGATAGGGAAAAAGACGGCGGAAGAAATTGTGGGGCAGCTTGGCAGTCAGACGCTTCATAAAATTATGCGTGACC
CAGCTGTTTTGTATGACGTTCCGCGCTTATCAAAAAAGAAGGCAGATAAGCTGGCCGCAGCGCTCCAGGAGCATCAAGGA
TTGGAACAAATCATGATCAGCCTGAATCAATATGGCTTTGGTCCACAGCTCAGCATGAAGATATATCAAGTGTACGAGAG
TGAGACGCTGCAGAAGATTGAAGAAAACCCTTATCAGCTCGTCAAGGATGTCGAAGGAATCGGATTTATTAAGGCGGATG
AACTTGGCGCTAGAACCGGTATCTCAGGAAATGACCCAGAGCGAATCCGTGCAGCCTTGCTTTATACAGTGGAGACAGCC
AGCCTTCAGGACGGTCATACGTACATACAAACAAAGGATTTGATCGTCGAAACCCGAAAACTGCTCAATCAGACAGGCAA
TGAGTACAAAGTGACGGAAATGGACGTCGCCAATCAGATCATTGCACTTGGCGAAGGGAAAGAGATGATCATTGAAGATG
AGCGCTGCTATCATCCGTCCTTATTTTATGCCGAGCAAAGTGTCGCCAAACGTATACAAAAAATCGTCTCCCAAACGGAA
TATGCAGACCAATTCCCTGAATCAGAATTCCTTCTAGCCCTTGGTGAGCTAGAGGAACGGCTGGGCGTCCAGTATGCACC
GACACAAAAAGAAGCGATTCAAAAGGCGCTCATGTCCCCAATGCTGCTTTTAACAGGCGGACCTGGGACTGGGAAGACAA
CAGTCATTAAAGGGATTGTTGAGCTTTACAGCGATCTTCACGGTGTATCTCTTGATCCGAGTGATTACAAAAAAGATGAA
TCCTTTCCATTTGTGCTTGCGGCGCCAACTGGACGAGCAGCTAAACGAATGACAGAATCAACAGGGCTTCCAGCTGTGAC
GATTCACCGGCTGCTTGGTTGGAATGGGTCAGAGGGATTCTCGCATGATGAAGAACAGCCGATTGAAGGAAAGCTTGTCA
TTATTGATGAATCAAGTATGCTAGATATTTGGCTTGCGAATCACTTGTTTAAGGCCATTCCTGACCATATCCAAGTGATC
ATGGTGGGGGATGAACATCAGCTTCCGTCTGTCGGACCAGGCCAAGTGTTAAGAGACTTGCTTGCATCACAAGCTGTGCC
AGCTGTTACCCTGACAGATATTTACCGTCAGGCAGACGGCTCCAGCATTGTTGAGCTTGCACATGATATGAAAAATGGCG
TCCTGCCAAAGGATATTACCGCACGTTCAAAGGATCGATCTTTCATAAAATGCTCAGTTGATCAAATGAAAGAAGTGATT
GAGAAAGTCGTCAGCAATGCTGCTCAAAAAGGCTATTCAGCTAAAGACATTCAAGTGCTTGCGCCCATGTATAAAGGAAA
AGCAGGCATTAATGAGCTCAATAAAATGCTGCAGCACATTTTAAATCCTAAAAAACCAAAGGGCAGAGAAATCCCGTTTG
GTGATGTGGTGTACCGGACCGGTGATAAAGTGCTTCAGCTTGTGAATCAGCCGGAGAACAATATTTTTAACGGTGATATT
GGCGAAATTGTCTCGATTTTTTATGCGAAAGAAAACACGGAAAAAGAAGACATGGCTGTGATCTCCTTTGATGGGAATGA
AATTACCTTTACAAAAAAGGATTTTCATCAATTTACACATGCCTATTGCTGCTCCATCCACAAATCACAAGGCAGTGAAT
TCCCCATCGTTGTGCTTCCAGTCGTGAGAAGCTACTACAGAATGCTTCGGCGAAATCTGCTGTACACAGCCATTACACGA
AGTAAAAAGTTTTTAATTCTGTGCGGCGAGGAATCAGCACTGGAGTGGGGCGTGAAAAACAATGAGGATTCGCTCAGACA
AACGTCCTTAACGATGCGGCTCGTGCAAACCGAAGAGGTTATGGATGCGGAGCTTGCAGCACTTCAAAAAGAACTGCCGT
TTAGCGTGCATGATGCAAATATCGGTATGGAGGGAATCACTCCATTTGATTTTATGCATGAATAA

Domains

Predicted by InterproScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• AAA domain (AAA_30) (345-552)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	80.276	100	0.805