Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   NQZ98_RS01315 Genome accession   NZ_CP102135
Coordinates   238887..241220 (+) Length   777 a.a.
NCBI ID   WP_024400389.1    Uniprot ID   -
Organism   Streptococcus suis strain M106471_S40     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 233887..246220
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ98_RS01295 (NQZ98_01295) treP 234541..236535 (-) 1995 WP_053866905.1 PTS system trehalose-specific EIIBC component -
  NQZ98_RS01300 (NQZ98_01300) treR 236770..237483 (+) 714 WP_024402907.1 trehalose operon repressor Regulator
  NQZ98_RS01305 (NQZ98_01305) - 237541..237852 (+) 312 WP_002935948.1 hypothetical protein -
  NQZ98_RS01310 (NQZ98_01310) - 237849..238397 (+) 549 WP_024400390.1 CvpA family protein -
  NQZ98_RS01315 (NQZ98_01315) mutS/mutS2 238887..241220 (+) 2334 WP_024400389.1 endonuclease MutS2 Machinery gene
  NQZ98_RS01320 (NQZ98_01320) - 241386..241778 (+) 393 WP_024400388.1 DUF1310 family protein -
  NQZ98_RS01325 (NQZ98_01325) - 241771..242034 (+) 264 WP_024400387.1 hypothetical protein -
  NQZ98_RS01330 (NQZ98_01330) - 242060..242449 (+) 390 WP_002935938.1 DUF1310 family protein -
  NQZ98_RS01335 (NQZ98_01335) - 242442..243692 (+) 1251 WP_024400386.1 Mbeg1-like protein -
  NQZ98_RS01340 (NQZ98_01340) - 243794..244174 (+) 381 WP_024400385.1 DUF1310 family protein -
  NQZ98_RS01345 (NQZ98_01345) - 244181..245443 (+) 1263 WP_029750135.1 triacylglycerol lipase -
  NQZ98_RS01350 (NQZ98_01350) - 245422..245808 (+) 387 WP_024400383.1 hypothetical protein -
  NQZ98_RS01355 (NQZ98_01355) - 245821..246141 (+) 321 WP_002935924.1 hypothetical protein -

Sequence

Protein


Download         Length: 777 a.a.        Molecular weight: 87616.31 Da        Isoelectric Point: 6.6846

>NTDB_id=614771 NQZ98_RS01315 WP_024400389.1 238887..241220(+) (mutS/mutS2) [Streptococcus suis strain M106471_S40]
MNNKIIETLEFHKVRQKIEPYLLTEQGFEELRQLEPMVEVHRIQQAFDELTDIAQIFVENPYFSLAATSDIGPAMRRLEL
DTDLNIAELLAVKKVLEVSKSLLDFYGNLENVSLSQLDKLFEKIELFPHLQGSLQSINDASFVEDFASEKLARIRRKIRE
AEDQVRQVMQDILKTKGDMLSDSILASRNGRNVLPVKNTYRNKIAGVVHDISASGSTVYIEPRAVVTLNEEISHLRAEER
HELNRILQELSDMLRPHSGVIRNNAWLIGHIDFVRAKHLFAREHQAVVPKLSEKQDIALLNVRHPLIAKPVPNDLYFGSQ
LTAIVITGPNTGGKTIMLKTLGLTHLMAQSGLPILADKGSRVAIFKEIFADIGDEQSIEQSLSTFSSHMTHTVEILRAAD
QDSLILFDELGAGTDPQEGASLAMAILDDLRLRGIKTMATTHYPELKAYGIETSGIENASMEFDTNSLRPTYKFMQGVPG
RSNAFEIARRLGLSDIIIQSAQSWTDTDSDVNRIIENLESQTVESRQRLDKIRDVEQENYKMNRALRKLYDELNRERENE
LNKARLEAKEIVDMALAESEDILKNLHAAASLKPHQIIEAKAELKKLAPEVVDLSKNKVLKKAKIQREAKVGDDIIVTAY
GQRGTLTNQLKDGRWEAQVGLIKMNLAKDEFELVKAEKAEHPKKRQIHTVKRANVRGPKARLDLRGKRYEEAMMELDEFI
DQALLNNLAQVDIVHGIGTGVIREGVAKYLRRNKQVKEFGYAPQNAGGSGCTIVTFK

Nucleotide


Download         Length: 2334 bp        

>NTDB_id=614771 NQZ98_RS01315 WP_024400389.1 238887..241220(+) (mutS/mutS2) [Streptococcus suis strain M106471_S40]
ATGAATAATAAAATTATTGAAACCCTTGAATTTCACAAGGTAAGACAAAAAATTGAGCCCTATCTCTTGACGGAACAGGG
CTTTGAAGAATTACGACAGTTGGAGCCCATGGTGGAAGTCCATCGTATCCAACAGGCCTTCGACGAGTTGACAGACATAG
CGCAGATTTTTGTGGAAAATCCCTATTTCAGTCTGGCTGCTACTAGTGATATCGGTCCAGCCATGCGTCGTTTGGAATTG
GATACAGACCTCAATATCGCTGAATTATTAGCTGTTAAAAAGGTCTTGGAAGTTTCTAAATCTCTCTTGGACTTTTATGG
AAATCTGGAAAATGTCAGCCTAAGCCAGCTGGATAAACTCTTTGAGAAAATCGAGCTCTTTCCCCACTTACAAGGTTCGC
TCCAGTCTATCAATGATGCAAGCTTTGTCGAGGATTTTGCCTCAGAAAAGCTGGCTCGTATCCGCCGGAAAATCCGTGAA
GCTGAAGATCAAGTTCGTCAGGTCATGCAGGATATTTTGAAGACCAAGGGCGACATGCTGTCCGATAGCATTTTGGCAAG
CCGTAATGGACGCAATGTCCTTCCTGTTAAAAATACCTATCGCAATAAGATTGCAGGGGTTGTCCATGATATCTCCGCCT
CAGGTTCGACCGTTTATATTGAGCCGCGGGCAGTGGTGACCTTGAACGAAGAAATCAGTCACCTACGTGCAGAAGAACGC
CATGAGCTCAACCGTATCTTGCAGGAATTGTCGGATATGCTCCGTCCGCATAGTGGCGTGATTCGTAACAATGCCTGGCT
TATCGGGCATATTGATTTCGTCCGTGCTAAGCATCTCTTTGCGCGTGAACATCAAGCAGTTGTACCCAAACTATCTGAGA
AGCAGGATATTGCCCTTCTCAACGTTCGGCATCCGCTCATTGCTAAGCCTGTACCAAATGACCTTTATTTCGGTAGTCAG
TTGACGGCTATCGTGATAACAGGTCCCAACACAGGTGGTAAGACCATCATGCTTAAGACCTTGGGATTGACCCATCTGAT
GGCTCAGTCTGGTTTGCCTATTTTGGCTGATAAGGGTAGTCGGGTAGCTATCTTCAAAGAAATTTTTGCGGATATTGGGG
ATGAACAGTCGATTGAGCAGAGTTTATCAACCTTCTCCAGTCACATGACCCACACGGTGGAGATTTTAAGAGCAGCTGAT
CAAGATTCTCTCATTCTATTTGACGAGTTGGGAGCTGGGACAGATCCGCAAGAGGGTGCGTCTTTGGCTATGGCCATCTT
AGATGACCTTCGTTTGCGGGGGATCAAGACCATGGCAACCACCCACTATCCTGAGCTCAAGGCCTATGGGATAGAAACCT
CTGGTATTGAAAATGCCAGCATGGAATTTGATACCAATAGCCTACGGCCAACCTATAAGTTTATGCAGGGTGTTCCTGGT
CGCTCCAATGCCTTTGAAATTGCTCGCCGTCTTGGTCTATCTGATATTATTATCCAGTCAGCCCAATCTTGGACGGATAC
AGATAGCGATGTGAACCGCATTATCGAGAATTTGGAAAGTCAGACGGTTGAAAGTCGTCAGCGTCTGGATAAGATTCGTG
ATGTGGAGCAAGAAAATTACAAGATGAACCGAGCCCTCCGCAAGCTCTATGACGAGCTCAATCGTGAGCGGGAAAATGAG
CTCAACAAGGCACGCTTGGAAGCCAAGGAAATTGTAGATATGGCATTGGCAGAAAGCGAGGATATTCTCAAAAATCTCCA
TGCTGCAGCCAGTCTTAAGCCCCACCAGATTATCGAAGCCAAGGCAGAGCTGAAAAAGTTGGCGCCTGAAGTGGTGGATC
TGTCTAAAAATAAGGTTCTGAAGAAAGCTAAAATTCAGCGGGAAGCCAAGGTGGGGGATGATATTATCGTTACAGCTTAT
GGACAACGTGGGACCCTGACCAATCAGCTTAAAGATGGACGTTGGGAAGCTCAGGTTGGTTTGATTAAGATGAACTTGGC
CAAAGATGAGTTTGAGTTAGTCAAGGCGGAAAAGGCAGAGCATCCTAAGAAACGCCAGATTCACACAGTCAAACGTGCCA
ATGTACGAGGACCAAAAGCCCGCTTAGATCTCCGTGGTAAACGCTACGAAGAGGCTATGATGGAACTGGATGAATTTATC
GATCAGGCCCTTCTCAACAATCTGGCACAAGTAGACATTGTCCACGGTATTGGTACTGGAGTTATCCGAGAAGGGGTGGC
CAAGTACCTACGCCGCAACAAGCAGGTCAAGGAGTTCGGCTATGCCCCACAAAATGCAGGTGGATCAGGCTGTACTATTG
TGACGTTTAAATAA

Domains

Predicted by InterProScan.

MutS2 and Smr-associated SH3 domain (MSSS)

(631-670)

Smr domain (Smr)

(702-777)

MutS domain V (MutS_V)

(324-504)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.52

100

0.403