Detailed information NTG0614769

Bioinformatically predicted

Overview

• Name: recD/recD2/recDB
• Type: Machinery gene
• Locus tag: NQZ98_RS01265
• Genome accession: NZ_CP102135
• Coordinates: 225541..228030 (-)
• Length: 829 a.a.
• NCBI ID: WP_171997358.1
• Uniprot ID: -
• Organism: Streptococcus suis strain M106471_S40
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 220541..233030

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NQZ98_RS01240 (NQZ98_01240)	-	221012..221203 (+)	192	WP_257116646.1	hypothetical protein	-
NQZ98_RS01245 (NQZ98_01245)	-	221295..222431 (+)	1137	WP_024383150.1	adenine-specific methyltransferase EcoRI family protein	-
NQZ98_RS01250 (NQZ98_01250)	-	222435..223598 (+)	1164	WP_171997361.1	DUF262 domain-containing protein	-
NQZ98_RS01255 (NQZ98_01255)	-	223765..224685 (+)	921	WP_171997360.1	1-phosphofructokinase family hexose kinase	-
NQZ98_RS01260 (NQZ98_01260)	-	224738..225373 (+)	636	WP_171997359.1	endonuclease III domain-containing protein	-
NQZ98_RS01265 (NQZ98_01265)	recD/recD2/recDB	225541..228030 (-)	2490	WP_171997358.1	ATP-dependent RecD-like DNA helicase	Machinery gene
NQZ98_RS01270 (NQZ98_01270)	lepB	228095..228724 (-)	630	WP_024386967.1	signal peptidase I	-
NQZ98_RS01275 (NQZ98_01275)	rnhC	228734..229624 (-)	891	WP_171997357.1	ribonuclease HIII	-
NQZ98_RS01280 (NQZ98_01280)	-	229709..230692 (+)	984	WP_044677679.1	Gfo/Idh/MocA family protein	-
NQZ98_RS01285 (NQZ98_01285)	-	231041..232267 (+)	1227	WP_171997356.1	LysM peptidoglycan-binding domain-containing protein	-

Sequence

Protein

• Length: 829 a.a.
• Molecular weight: 92912.98 Da
• Isoelectric Point: 4.5193

>NTDB_id=614769 NQZ98_RS01265 WP_171997358.1 225541..228030(-) (recD/recD2/recDB) [Streptococcus suis strain M106471_S40]
MNEVYFTGTIDRIIFENPSNFYKILLLEIEETDADYDDYEIIVTGTIADVIEGEDYRFYGTLVTHPKYGQQLQISRYERS
KPTSAGLVKYFSSEHFKGIGRKTAEKIVELYGEDTIDKILAEPEKLTQITGLSSKNMQAFVEKLRLNYGTELILAKLAEY
GIPNKLAFQIQDQYKEKTLQIIEENPYQLVEDVQGLGFTIADRIAENLGIASDSPQRFRAGMLFSLIHRSMETGDTYVEA
RDLLEATLELLEKSRHTELDPAAVAKELTGLIADDKVQQEGTKIFDNSLYFAEHGIHKNLTRLMGKNGFKPFPRADVEAA
IAELESMSSLTYDDIQKEAIVQAITNPLFILTGGPGTGKTTVINGIIAVYAILHKIDLTRNREECPVLLAAPTGRAARRM
NELTGLPSATIHRHLGLVEGQEESYRDDYLDADFIIVDEFSMVDTWLANQLFQNISSQTQVLIVGDAEQLPSVSPGQVLA
DLLKIDKLPSITLERIYRQSDDSTIVTLASQIHQGALPSDFREKKADRSYFEAQNEQIPALIERIVGAAIKSGIPANEVQ
ILAPMYRGAAGIDQLNTMTQALLNPLEDGELEFLHNEQAFRQGDRVIHLVNDAEANVFNGDLGYITDLLPAKYTDSKQDE
ITINFDGSEVTYPRNEWYKITLAYAMSIHKSQGSEFQVVILPITRTSHRMLQRNLVYTAITRSKSKLILLGEISAFDYAV
KNAGTVRKTYLVPRFQGEMAEQDSKESLTENNESKTATATQTQPPAQSDKPKQIEPVTENSQQLSLLDQDQPEKTSGQPR
EYILTVDNLLTIDPMIGIDQADIEEFFKA

Nucleotide

• Length: 2490 bp

>NTDB_id=614769 NQZ98_RS01265 WP_171997358.1 225541..228030(-) (recD/recD2/recDB) [Streptococcus suis strain M106471_S40]
ATGAATGAAGTTTATTTTACCGGTACTATTGACCGGATTATTTTTGAAAATCCTAGTAATTTTTATAAAATCCTTCTCCT
TGAAATCGAGGAGACAGACGCAGACTATGATGACTACGAAATTATTGTGACCGGAACGATTGCCGATGTCATTGAAGGAG
AAGACTATCGTTTCTATGGCACTCTGGTCACCCATCCCAAGTATGGTCAGCAGCTGCAAATTTCGCGTTACGAACGCAGC
AAGCCTACCTCAGCTGGTCTGGTCAAGTATTTCTCCAGCGAGCATTTCAAGGGAATTGGACGCAAAACAGCTGAAAAAAT
TGTTGAGCTCTATGGCGAAGATACCATTGATAAGATTTTAGCTGAACCTGAAAAACTAACCCAAATCACAGGCCTATCCA
GCAAGAACATGCAGGCATTTGTCGAAAAACTCCGCCTCAATTATGGAACCGAGTTGATCTTGGCAAAACTAGCCGAGTAT
GGCATTCCCAATAAATTGGCCTTTCAAATCCAAGACCAGTATAAGGAAAAAACACTTCAGATTATTGAAGAAAATCCCTA
TCAACTGGTCGAAGATGTCCAGGGGCTCGGCTTTACCATTGCCGATAGGATTGCGGAAAATCTAGGAATTGCCAGTGATT
CACCCCAACGCTTTCGGGCTGGCATGCTCTTTAGCCTCATTCATCGCTCCATGGAAACAGGCGATACCTATGTGGAGGCC
AGAGACTTGCTGGAAGCAACCCTTGAACTGCTGGAAAAATCCCGCCATACAGAGCTGGACCCCGCTGCTGTTGCCAAAGA
ATTGACGGGACTGATTGCAGACGACAAGGTACAGCAAGAAGGCACAAAGATTTTTGACAACAGCCTCTACTTTGCCGAAC
ATGGTATCCATAAAAACCTGACCCGCCTGATGGGAAAAAATGGTTTCAAACCCTTCCCACGCGCAGACGTTGAGGCTGCC
ATAGCAGAGCTGGAAAGTATGTCTTCCCTGACCTACGATGACATTCAAAAAGAAGCCATCGTCCAAGCCATTACCAATCC
GCTTTTCATTCTGACAGGCGGACCAGGGACTGGAAAAACAACGGTTATCAACGGTATTATCGCAGTCTATGCCATCTTGC
ATAAGATTGACCTGACTCGCAACCGAGAAGAATGCCCAGTCCTCCTAGCCGCTCCAACTGGACGAGCAGCCAGACGGATG
AATGAATTGACAGGCCTGCCTTCTGCCACCATCCACCGCCATCTCGGTCTGGTAGAAGGACAGGAAGAATCCTACCGCGA
TGATTATTTGGATGCCGACTTTATCATCGTGGATGAGTTTTCTATGGTCGACACTTGGTTGGCAAACCAGCTCTTCCAGA
ACATCTCCTCCCAAACCCAAGTTCTGATTGTCGGCGATGCGGAGCAATTACCTTCCGTCAGTCCCGGTCAGGTCCTAGCT
GACCTCTTGAAAATTGACAAGCTACCCAGCATCACTCTAGAACGCATCTACCGTCAATCCGATGATTCGACCATTGTTAC
CCTAGCCAGCCAGATTCACCAAGGGGCCCTGCCGAGCGATTTCCGTGAGAAAAAGGCTGACCGCTCCTATTTTGAAGCGC
AAAACGAACAAATTCCAGCTCTGATTGAACGCATTGTAGGCGCAGCCATCAAGTCGGGAATTCCTGCAAACGAAGTCCAA
ATCCTCGCTCCCATGTACCGTGGGGCCGCAGGCATTGACCAACTCAACACCATGACCCAGGCCCTGCTCAATCCCCTAGA
AGACGGAGAGCTGGAATTCCTCCACAACGAGCAGGCCTTTCGTCAAGGCGACCGAGTCATCCACCTAGTCAACGATGCTG
AGGCCAATGTCTTCAATGGTGATTTGGGCTACATCACAGACCTCCTGCCTGCCAAGTACACCGACTCCAAGCAGGACGAG
ATTACCATCAACTTCGACGGTAGCGAGGTCACCTATCCCCGTAACGAATGGTACAAGATCACCCTGGCCTATGCCATGTC
CATCCACAAGTCCCAAGGTAGTGAGTTCCAGGTGGTCATCCTTCCCATCACGCGCACCAGCCACCGCATGCTCCAGCGCA
ACCTAGTCTACACCGCCATCACCCGCTCCAAGAGCAAGCTCATCCTCCTAGGCGAAATCTCCGCCTTCGACTACGCCGTC
AAAAACGCCGGCACCGTTAGGAAAACCTATCTGGTCCCACGTTTCCAAGGGGAAATGGCAGAGCAGGACAGCAAGGAAAG
CCTGACAGAAAACAACGAAAGCAAAACAGCCACAGCCACGCAAACCCAGCCACCTGCCCAGTCAGATAAGCCAAAACAAA
TAGAGCCAGTAACAGAAAACAGCCAGCAACTATCCCTTCTTGACCAAGACCAGCCAGAAAAAACAAGTGGCCAACCCAGA
GAATACATTCTGACGGTGGACAACCTGCTAACCATCGACCCCATGATTGGCATAGATCAGGCAGATATTGAAGAGTTTTT
TAAAGCATAA

Domains

Predicted by InterProScan.

• AAA domain (AAA_30) (332-529)

• Helix-hairpin-helix containing domain (HHH_RecD2) (148-237)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (663-710)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (575-645)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD/recD2/recDB	Bacillus subtilis subsp. subtilis str. 168	41.402	91.194	0.378