Detailed information NTG0614741

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: NQZ84_RS10220
• Genome accession: NZ_CP102094
• Coordinates: 2116210..2117481 (+)
• Length: 423 a.a.
• NCBI ID: WP_257047606.1
• Uniprot ID: -
• Organism: Streptococcus suis strain 12RC1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2111210..2122481

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NQZ84_RS10200 (NQZ84_10200)	-	2114674..2114868 (-)	195	Protein_1979	DUF3013 family protein	-
NQZ84_RS10205 (NQZ84_10205)	-	2115043..2115150 (+)	108	WP_220125338.1	putative holin-like toxin	-
NQZ84_RS10210 (NQZ84_10210)	-	2115311..2115664 (-)	354	WP_024414260.1	ASCH domain-containing protein	-
NQZ84_RS10215 (NQZ84_10215)	-	2115666..2116136 (-)	471	WP_074413882.1	DUF3013 family protein	-
NQZ84_RS10220 (NQZ84_10220)	rarA	2116210..2117481 (+)	1272	WP_257047606.1	replication-associated recombination protein A	Machinery gene
NQZ84_RS10235 (NQZ84_10235)	nrdG	2117978..2118535 (-)	558	WP_024409077.1	anaerobic ribonucleoside-triphosphate reductase activating protein	-
NQZ84_RS10240 (NQZ84_10240)	-	2118722..2119216 (-)	495	WP_024409076.1	GNAT family N-acetyltransferase	-
NQZ84_RS10245 (NQZ84_10245)	-	2119218..2120564 (-)	1347	WP_044676751.1	bifunctional metallophosphatase/5'-nucleotidase	-
NQZ84_RS10250 (NQZ84_10250)	-	2120566..2120700 (-)	135	WP_002939130.1	hypothetical protein	-

Sequence

Protein

• Length: 423 a.a.
• Molecular weight: 46747.30 Da
• Isoelectric Point: 6.0968

>NTDB_id=614741 NQZ84_RS10220 WP_257047606.1 2116210..2117481(+) (rarA) [Streptococcus suis strain 12RC1]
MPANLALRMRPKSIDDVIGQEHLVGPGKIIRRMIDANMLSSMILYGPPGIGKTSIASAIAGTTKYAFRTFNATTDNQKRL
QEIAEEAKFSGGLVLMLDEIHRLNKTKQDFLLPLLENGNIIMIGATTENPFFSILPAIRSRVQIFELQPLETSHIRQALE
LALTDSERGFDFPVTIEPEALDFLANATNGDLRAAYNSLELAVLSTKESDDGSRHIDLDAVENSLQKSYISMDKNGDAHY
DILSALQKSIRGSDVNASLHYAARLIEAEDLPSLARRLTVIAYEDIGLANPEAQIHTVTALEAAQKIGFPEARILIANVV
IDLALSPKSNSAYLAMDTALADLRKNGHLPIPNHLRDGHYAGSKELGNAIGYQYPHAYPEKWVDQQYLPDKLLHADYFTA
NDTGKYERALGMTQEKIKNLKKK

Nucleotide

• Length: 1272 bp

>NTDB_id=614741 NQZ84_RS10220 WP_257047606.1 2116210..2117481(+) (rarA) [Streptococcus suis strain 12RC1]
ATGCCAGCCAATCTCGCCCTTCGTATGCGGCCCAAATCCATTGATGACGTCATCGGTCAGGAACACCTGGTCGGTCCTGG
AAAAATTATCCGCCGCATGATTGATGCCAATATGCTGTCGTCCATGATTCTCTACGGTCCGCCGGGAATTGGCAAGACCT
CGATTGCGTCCGCAATTGCTGGCACGACCAAGTATGCCTTTCGGACCTTTAATGCCACGACCGACAACCAAAAACGCCTG
CAGGAAATCGCTGAAGAAGCTAAATTTTCTGGTGGTCTGGTTCTCATGCTCGATGAGATTCATCGCCTCAACAAGACTAA
ACAGGACTTCCTGCTTCCTCTTTTGGAAAACGGCAATATCATCATGATTGGAGCAACGACGGAAAATCCCTTCTTCTCAA
TTTTGCCTGCCATTCGCAGTCGGGTGCAGATTTTTGAATTGCAGCCATTGGAAACCAGCCATATCCGACAGGCCTTGGAG
CTAGCTCTGACAGACAGCGAACGTGGTTTTGATTTTCCTGTCACCATTGAGCCTGAGGCTCTGGACTTTCTAGCCAATGC
TACCAACGGCGACCTTCGGGCTGCCTACAATTCGCTGGAACTAGCTGTACTTTCGACCAAGGAAAGTGACGACGGTAGCC
GCCACATTGATCTGGACGCCGTCGAAAATAGCCTGCAAAAATCCTACATCAGTATGGACAAGAACGGCGATGCCCACTAT
GACATCCTCTCCGCCCTGCAAAAATCCATTCGGGGTAGCGATGTCAATGCCAGCCTCCACTACGCCGCTCGTTTGATTGA
GGCCGAAGACCTACCTAGCCTGGCCCGTCGCTTGACCGTCATTGCCTACGAAGACATCGGCTTGGCCAATCCAGAGGCTC
AGATTCATACAGTGACTGCACTTGAAGCTGCCCAGAAAATCGGCTTTCCAGAAGCACGGATTTTGATTGCCAATGTGGTG
ATTGATTTGGCTCTTTCTCCCAAGTCCAATTCTGCCTATCTGGCTATGGATACAGCTCTGGCTGATTTGCGAAAGAACGG
CCATCTGCCCATTCCAAATCATCTTCGGGACGGACATTACGCTGGCAGTAAGGAGCTGGGAAATGCTATTGGCTACCAGT
ATCCACATGCCTATCCTGAGAAATGGGTGGACCAACAATACCTGCCTGATAAGTTACTTCATGCGGACTACTTCACTGCC
AACGACACTGGAAAATATGAGCGTGCCTTGGGCATGACACAAGAAAAGATAAAAAATTTGAAAAAAAAATAG

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-416)

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

• AAA C-terminal domain (AAA_assoc_2) (173-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	60.048	98.818	0.593