Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   NQZ84_RS02485 Genome accession   NZ_CP102094
Coordinates   492201..492935 (+) Length   244 a.a.
NCBI ID   WP_002943067.1    Uniprot ID   A0A0H3MU26
Organism   Streptococcus suis strain 12RC1     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 487201..497935
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ84_RS02460 (NQZ84_02460) - 487710..488018 (-) 309 WP_002938710.1 DUF1827 family protein -
  NQZ84_RS02465 (NQZ84_02465) - 488073..488534 (-) 462 WP_002938708.1 NUDIX hydrolase -
  NQZ84_RS02470 (NQZ84_02470) clpE 488720..490939 (-) 2220 WP_257049312.1 ATP-dependent Clp protease ATP-binding subunit Regulator
  NQZ84_RS02475 (NQZ84_02475) - 491163..491393 (+) 231 WP_002938704.1 DUF1797 family protein -
  NQZ84_RS02480 (NQZ84_02480) - 491519..492208 (+) 690 WP_002938702.1 amino acid ABC transporter permease -
  NQZ84_RS02485 (NQZ84_02485) amiE 492201..492935 (+) 735 WP_002943067.1 amino acid ABC transporter ATP-binding protein Regulator
  NQZ84_RS02490 (NQZ84_02490) - 493065..493913 (+) 849 WP_044769449.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -
  NQZ84_RS02495 (NQZ84_02495) - 494156..496339 (+) 2184 WP_257049306.1 YSIRK-type signal peptide-containing protein -
  NQZ84_RS02500 (NQZ84_02500) - 496501..497046 (+) 546 WP_136581136.1 hypothetical protein -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 26881.11 Da        Isoelectric Point: 4.7252

>NTDB_id=614680 NQZ84_RS02485 WP_002943067.1 492201..492935(+) (amiE) [Streptococcus suis strain 12RC1]
MSNAIISIKDLHKYFGKNEVLKGIDLDIQQGQVVVIIGPSGSGKSTFLRTMNLLEVPTKGTVTFEGVDITDKSNDIFKMR
EKMGMVFQQFNLFPNMTVLDNITLSPIKTKGIAKDEAEKKAKELLEKVGLPDKANAYPQSLSGGQQQRIAIARGLAMDPD
VLLFDEPTSALDPEMVGEVLAVMQDLAKSGMTMVIVTHEMGFAREVADRVIFMDGGVIVEDGTPEEVFEHTKEERTKDFL
SKVL

Nucleotide


Download         Length: 735 bp        

>NTDB_id=614680 NQZ84_RS02485 WP_002943067.1 492201..492935(+) (amiE) [Streptococcus suis strain 12RC1]
ATGTCTAATGCGATTATTTCTATCAAGGATTTACATAAGTACTTCGGAAAGAATGAGGTTCTAAAAGGAATTGATTTAGA
TATTCAACAAGGTCAGGTGGTCGTTATTATCGGTCCATCAGGGTCAGGGAAATCGACTTTCTTACGTACAATGAACCTCT
TAGAAGTGCCAACCAAGGGAACTGTTACATTTGAAGGTGTTGATATTACTGACAAGTCAAATGATATTTTCAAGATGCGT
GAAAAGATGGGAATGGTTTTTCAACAGTTCAATCTTTTTCCAAATATGACGGTATTAGATAATATTACTTTATCACCTAT
TAAGACAAAGGGAATTGCAAAGGATGAGGCTGAGAAGAAGGCTAAGGAATTACTTGAAAAGGTAGGATTGCCAGATAAGG
CAAATGCCTATCCACAAAGTCTTTCAGGTGGTCAGCAACAACGGATCGCTATTGCACGTGGTCTGGCCATGGACCCAGAT
GTCCTACTTTTTGATGAACCGACCTCTGCACTAGACCCTGAAATGGTTGGTGAAGTTCTTGCTGTAATGCAGGATTTGGC
CAAGTCAGGGATGACCATGGTTATCGTGACTCATGAGATGGGATTTGCGCGTGAGGTAGCTGACAGGGTTATCTTTATGG
ATGGCGGTGTCATCGTGGAGGATGGAACGCCTGAAGAAGTTTTTGAACATACCAAGGAAGAACGGACCAAGGATTTCTTG
TCTAAGGTCTTGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(21-169)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3MU26

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

34.496

100

0.365
  amiE Streptococcus thermophilus LMG 18311

34.496

100

0.365
  amiE Streptococcus thermophilus LMD-9

34.496

100

0.365