Detailed information NTG0614427

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: LG311_RS15485
• Genome accession: NZ_CP085008
• Coordinates: 2980150..2982552 (-)
• Length: 800 a.a.
• NCBI ID: WP_404347021.1
• Uniprot ID: -
• Organism: Sutcliffiella horikoshii strain SLM-179
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2975150..2987552

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LG311_RS15455 (LG311_15395)	-	2975504..2976862 (-)	1359	WP_404347015.1	NAD(P)-dependent oxidoreductase	-
LG311_RS15460 (LG311_15400)	-	2976994..2977884 (-)	891	WP_404347016.1	nitrilase-related carbon-nitrogen hydrolase	-
LG311_RS15465 (LG311_15405)	-	2978417..2978572 (-)	156	WP_404347018.1	YrzQ family protein	-
LG311_RS15470 (LG311_15410)	-	2978595..2978789 (-)	195	WP_047969446.1	hypothetical protein	-
LG311_RS15475 (LG311_15415)	-	2978805..2979278 (-)	474	WP_223490330.1	PRC-barrel domain-containing protein	-
LG311_RS15480 (LG311_15420)	-	2979465..2980064 (+)	600	WP_404347019.1	hypothetical protein	-
LG311_RS15485 (LG311_15425)	recD2	2980150..2982552 (-)	2403	WP_404347021.1	ATP-dependent RecD-like DNA helicase	Machinery gene
LG311_RS15490 (LG311_15430)	-	2982571..2983227 (-)	657	WP_404347022.1	tetratricopeptide repeat protein	-
LG311_RS15495 (LG311_15435)	mnmA	2983315..2984430 (-)	1116	WP_404347024.1	tRNA 2-thiouridine(34) synthase MnmA	-
LG311_RS15500 (LG311_15440)	-	2984613..2985764 (-)	1152	WP_404347025.1	cysteine desulfurase family protein	-
LG311_RS15505 (LG311_15445)	cymR	2985812..2986228 (-)	417	WP_088018959.1	cysteine metabolism transcriptional regulator CymR	-
LG311_RS15510 (LG311_15450)	-	2986261..2986935 (-)	675	WP_404347027.1	YitT family protein	-

Sequence

Protein

• Length: 800 a.a.
• Molecular weight: 89920.15 Da
• Isoelectric Point: 4.7938

>NTDB_id=614427 LG311_RS15485 WP_404347021.1 2980150..2982552(-) (recD2) [Sutcliffiella horikoshii strain SLM-179]
MKDQKQQSSLDLFEENEKFIKGSHLVTIFHNESNMYSVVRIRVTETNVAYDEKEAVVTGYFPRIHEDETYIFFGQMKEHP
RFGLQFHVEHFRKDIPQSRHGIVQYLSSDLFSGIGRKTAEKIADALGENAISKILENPSVLDSIPKLAGDKAKSLYDTLM
EHQGLEQVMIALSQFGFGPQLSMKIYQAYKDQTIETLQKNPYELVETVEGIGFARADELGNHFGISGNHPDRIRAGCLYM
LEQHSMQEGHCYVFEDQLTEAVVRLLNEKQHGLVAESDISREIMQLTEEGKLKAEEGKVYLPSLYFSEQGVVTNIKRVLE
QTQYADQFPESEFLLALGELEDRLKVQYAPSQKEAIQQALMTPMLLLTGGPGTGKTTVIKGIVELYADLHGCSLEPNDYS
KDDPFPIMLVAPTGRAAKRMSEATGLPSLTIHRLLGWNGSEGFQHDEENPISGKLLIVDEVSMVDIWLANQLFKSLPEDI
QVVLVGDEDQLPSVGPGQVLKDLLASKVIPTVQLTDIYRQADGSSIIELAHDMKDGTVPADISSGQKDRSFIKCGQSQIL
DVVKKVCANAQSKGYTARDIQVLAPMYRGTAGIDKLNEMLQELFNPKSDQRRELSFGNVVYRTGDKVLQLVNQPESHVFN
GDIGEVVSIFYAKENTEKQDMVIVSFDGNEVTYTKQDLGQITHAYCCSIHKSQGSEFPIVVLPVVKSYYRMLRRNLLYTA
VTRAKRFLILCGEEEALKLGVQRADEMARQTSLKERLQTKESGTLPDEEVIDPVLQEVPFWKDANIGMENVSPYDFMDEE

Nucleotide

• Length: 2403 bp

>NTDB_id=614427 LG311_RS15485 WP_404347021.1 2980150..2982552(-) (recD2) [Sutcliffiella horikoshii strain SLM-179]
ATGAAGGACCAAAAGCAGCAATCCTCACTCGATTTGTTCGAGGAAAATGAAAAGTTTATTAAAGGGTCGCATCTTGTCAC
CATCTTCCATAATGAATCCAATATGTATTCAGTGGTGCGGATCCGAGTGACGGAGACGAATGTTGCGTATGATGAAAAAG
AAGCGGTCGTTACTGGTTATTTCCCTCGCATTCATGAAGACGAGACATACATATTTTTTGGACAGATGAAGGAACATCCT
CGTTTTGGGCTTCAATTTCATGTTGAGCACTTTCGTAAGGACATTCCACAATCACGTCACGGGATTGTCCAATATCTATC
AAGCGATTTGTTTTCAGGCATCGGAAGAAAAACGGCGGAAAAAATTGCAGATGCACTAGGTGAAAATGCCATCTCCAAAA
TACTTGAAAATCCTTCAGTGCTGGATTCCATTCCAAAGCTTGCCGGTGATAAAGCGAAATCGCTATATGACACATTGATG
GAACATCAAGGATTGGAACAGGTCATGATTGCCCTGTCACAGTTTGGTTTTGGTCCGCAATTGTCCATGAAAATTTATCA
AGCCTATAAAGATCAGACGATTGAAACGCTCCAAAAGAACCCGTACGAACTTGTGGAAACAGTAGAGGGTATTGGCTTTG
CCAGAGCAGATGAACTTGGAAATCACTTCGGGATATCGGGAAATCATCCAGACCGCATCAGGGCAGGCTGCCTGTATATG
CTGGAACAGCATTCCATGCAGGAGGGGCACTGTTACGTGTTTGAAGACCAGCTTACAGAAGCGGTCGTCAGACTTTTAAA
CGAAAAGCAGCATGGCCTTGTTGCAGAGTCTGACATTTCTCGGGAAATTATGCAATTGACTGAAGAAGGAAAGCTTAAAG
CGGAAGAAGGTAAAGTCTATTTACCTAGTCTCTATTTTTCAGAGCAAGGTGTGGTAACCAATATCAAAAGGGTGCTGGAG
CAAACTCAATATGCCGACCAGTTTCCTGAGTCAGAATTCCTCCTTGCCTTAGGTGAATTAGAAGACAGATTGAAGGTTCA
ATATGCTCCTTCGCAAAAAGAAGCCATACAGCAAGCATTAATGACTCCCATGCTTCTTTTGACAGGTGGGCCAGGAACAG
GTAAAACGACCGTTATTAAAGGAATCGTTGAACTGTACGCAGACCTTCATGGTTGTTCATTGGAACCTAATGATTACAGC
AAAGATGATCCTTTTCCGATTATGCTTGTCGCCCCAACAGGCCGTGCTGCCAAACGCATGAGCGAGGCGACTGGCCTTCC
TTCTCTTACTATTCATAGGCTACTCGGTTGGAATGGTTCGGAAGGGTTTCAACATGACGAAGAAAACCCCATCTCAGGTA
AGCTTTTGATTGTGGATGAGGTGTCAATGGTGGATATTTGGCTTGCCAATCAACTGTTTAAATCTCTTCCTGAGGATATA
CAAGTCGTATTAGTGGGAGATGAAGATCAGCTTCCTTCCGTTGGTCCAGGTCAAGTATTAAAGGACTTACTCGCATCCAA
AGTGATTCCTACCGTTCAATTGACTGATATCTACAGACAGGCAGATGGTTCATCCATCATTGAGTTGGCCCACGATATGA
AAGACGGTACAGTGCCAGCAGACATTTCATCCGGACAGAAGGACCGTTCTTTTATCAAATGCGGACAGTCGCAAATATTG
GATGTAGTAAAAAAAGTATGTGCCAACGCGCAAAGCAAGGGCTATACTGCCCGCGATATCCAGGTGCTTGCACCAATGTA
CAGAGGGACAGCGGGAATAGATAAACTTAATGAAATGCTTCAGGAGCTTTTCAATCCTAAAAGTGACCAGCGGCGTGAAT
TAAGTTTCGGCAATGTTGTATACAGGACCGGAGATAAAGTGCTGCAGCTTGTCAATCAACCGGAAAGTCATGTGTTCAAC
GGTGACATAGGTGAAGTGGTTTCCATCTTTTATGCGAAAGAAAATACCGAAAAACAGGACATGGTCATCGTATCCTTTGA
TGGCAATGAAGTTACTTATACGAAGCAAGATCTCGGGCAGATAACCCATGCATATTGTTGTTCTATACATAAGTCTCAAG
GAAGTGAGTTTCCGATTGTGGTATTGCCTGTAGTAAAGAGCTATTACAGGATGTTACGACGAAATCTACTTTACACAGCT
GTTACAAGAGCGAAGAGATTTTTAATTCTTTGCGGCGAAGAAGAAGCATTAAAGCTTGGCGTGCAACGCGCGGATGAGAT
GGCAAGGCAAACATCCTTGAAAGAAAGGCTTCAAACAAAAGAGTCCGGAACTTTACCAGACGAGGAAGTCATTGATCCTG
TACTTCAAGAAGTTCCTTTTTGGAAAGACGCTAACATCGGCATGGAGAATGTCAGTCCATATGATTTTATGGATGAAGAA
TAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (596-666)

• Helix-hairpin-helix containing domain (HHH_RecD2) (161-252)

• AAA domain (AAA_30) (348-556)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (683-731)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	63.659	99.75	0.635