Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   EL334_RS06935 Genome accession   NZ_AP019192
Coordinates   1298897..1300648 (-) Length   583 a.a.
NCBI ID   WP_000828844.1    Uniprot ID   A0A0H2ZNQ2
Organism   Streptococcus pneumoniae strain ASP0581     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1293897..1305648
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL334_RS06890 (ASP0581_12960) - 1293929..1294516 (-) 588 WP_126432072.1 CPBP family intramembrane glutamic endopeptidase -
  EL334_RS12265 - 1294519..1294752 (-) 234 Protein_1302 transcriptional regulator -
  EL334_RS06895 (ASP0581_12980) - 1294765..1295145 (-) 381 WP_000566531.1 arsenate reductase family protein -
  EL334_RS06900 (ASP0581_12990) - 1295138..1295478 (-) 341 Protein_1304 hypothetical protein -
  EL334_RS06905 (ASP0581_13000) - 1295489..1295740 (-) 252 Protein_1305 replication initiator protein A -
  EL334_RS06910 (ASP0581_13010) - 1295740..1295910 (-) 171 WP_001168348.1 hypothetical protein -
  EL334_RS06915 (ASP0581_13020) rplL 1296097..1296465 (-) 369 WP_001196960.1 50S ribosomal protein L7/L12 -
  EL334_RS06920 (ASP0581_13030) rplJ 1296541..1297041 (-) 501 WP_001287278.1 50S ribosomal protein L10 -
  EL334_RS06930 (ASP0581_13040) - 1297291..1298550 (-) 1260 WP_001858030.1 TRZ/ATZ family protein -
  EL334_RS06935 (ASP0581_13050) rcrQ 1298897..1300648 (-) 1752 WP_000828844.1 ABC transporter ATP-binding protein Regulator
  EL334_RS06940 (ASP0581_13060) - 1300650..1302374 (-) 1725 WP_000681687.1 ABC transporter ATP-binding protein -
  EL334_RS06945 (ASP0581_13070) msrB 1302432..1303370 (-) 939 WP_126432074.1 peptide-methionine (R)-S-oxide reductase MsrB -
  EL334_RS12270 (ASP0581_13080) - 1303437..1303679 (-) 243 WP_232051751.1 hypothetical protein -
  EL334_RS06955 (ASP0581_13090) thrB 1303755..1304624 (-) 870 WP_000692438.1 homoserine kinase -

Sequence

Protein


Download         Length: 583 a.a.        Molecular weight: 64876.41 Da        Isoelectric Point: 7.3119

>NTDB_id=61434 EL334_RS06935 WP_000828844.1 1298897..1300648(-) (rcrQ) [Streptococcus pneumoniae strain ASP0581]
MKRQTVNQTLKRLAVDLASHPFLLFLAFLGTIAQVGLSIYLPILIGQVIDQVLVAGSSPVFWQIFLQMLLVVIGNTLVQW
ANPLLYNRLIFSYTRDLRERIIHKLHRLPIAFVDRQGSGEMVSRVTTDIEQLAAGLTMIFNQFFIGVLMILVSILAMLQI
HLLMTLLVLLLTPLSMVISRFIAKKSYHLFQKQTETRGIQTQLIEESLSQQTIIQSFNAQTEFIQRLREAHDNYSGYSQS
AIFYSSTVNPSTRFVNALIYALLAGVGAYRIMMGSALTVGRLVTFLNYVQQYTKPFNDISSVLAELQSALACVERIYGVL
DSPEVAETGKEVLTTSDQVKGAISFKHVSFGYHPEKILIKDLSIDIPAGSKVAIVGPTGAGKSTLINLLMRFYPISSGDI
LLDGQSIYDYTRVSLRQQFGMVLQETWLTQGTIHDNIAFGNPEASREQVIAAAKAANADFFIQQLPQGYDTKLENAGESL
SVGQAQLLTIARVFLAIPKILILDEATSSIDTRTEVLVQDAFAKLMKGRTSFIIAHRLSTIQDADLILVLVDGDIVEYGN
HQELMDRKGKYYQMQKAAAFSSE

Nucleotide


Download         Length: 1752 bp        

>NTDB_id=61434 EL334_RS06935 WP_000828844.1 1298897..1300648(-) (rcrQ) [Streptococcus pneumoniae strain ASP0581]
ATGAAACGACAAACTGTAAACCAGACGCTCAAACGTTTAGCCGTAGATTTAGCAAGCCATCCTTTCCTCCTTTTCCTAGC
CTTTCTAGGAACTATTGCTCAAGTTGGCTTATCAATTTACCTACCTATTCTGATTGGGCAGGTCATTGACCAAGTCCTAG
TGGCTGGTTCATCACCAGTTTTTTGGCAGATTTTTCTCCAGATGCTCTTGGTGGTAATAGGAAATACTCTGGTACAATGG
GCCAATCCTCTCCTCTATAATCGTCTAATCTTCTCTTATACCAGAGATTTACGGGAGCGAATCATCCATAAGCTCCATCG
TTTACCGATTGCCTTTGTAGATAGGCAAGGTAGTGGAGAGATGGTTAGTCGTGTAACCACGGACATCGAACAGTTGGCAG
CTGGCTTGACCATGATTTTTAACCAATTTTTCATTGGTGTTTTGATGATTTTGGTCAGTATTCTAGCCATGCTCCAAATT
CATCTCCTCATGACTCTCTTAGTCTTGCTGTTGACGCCACTGTCCATGGTGATTTCACGCTTTATTGCCAAGAAATCCTA
TCATCTCTTCCAGAAGCAAACAGAGACGAGGGGAATTCAGACTCAGTTGATTGAAGAATCGCTTAGTCAGCAGACTATAA
TCCAGTCCTTCAATGCTCAAACAGAATTTATCCAAAGATTGCGTGAGGCTCATGACAACTACTCAGGCTATTCTCAGTCA
GCCATCTTTTATTCTTCAACGGTCAATCCTTCGACTCGCTTTGTAAATGCACTCATTTATGCCCTTTTAGCTGGAGTAGG
AGCTTATCGTATCATGATGGGTTCAGCCTTGACCGTCGGTCGTTTAGTGACTTTTTTGAACTATGTTCAGCAATACACCA
AGCCCTTTAACGATATTTCTTCAGTGCTAGCTGAGTTGCAAAGTGCTCTGGCTTGCGTAGAGCGTATCTATGGAGTCTTA
GATAGCCCTGAAGTGGCTGAAACAGGTAAGGAAGTCTTGACGACCAGTGACCAAGTTAAGGGAGCTATTTCCTTTAAACA
TGTCTCTTTTGGCTACCATCCTGAAAAAATTTTGATTAAGGACTTGTCTATCGATATTCCAGCTGGTAGTAAGGTAGCCA
TCGTTGGTCCGACAGGTGCTGGAAAATCAACTCTTATCAATCTCCTTATGCGTTTTTATCCCATTAGCTCGGGAGATATC
TTGCTGGATGGGCAATCCATTTATGATTATACACGAGTATCATTGAGACAGCAGTTTGGTATGGTGCTTCAAGAAACCTG
GCTCACACAAGGGACCATTCATGATAATATTGCCTTTGGCAATCCTGAAGCCAGTCGAGAGCAAGTAATTGCTGCTGCCA
AAGCAGCTAATGCAGACTTTTTCATCCAACAGTTGCCACAGGGATACGATACCAAGTTGGAAAATGCTGGAGAATCTCTC
TCTGTCGGCCAAGCTCAGCTCTTGACCATAGCCCGAGTCTTTCTGGCTATTCCAAAGATTCTTATCTTAGACGAGGCAAC
TTCTTCCATTGATACACGGACAGAAGTGCTGGTACAGGATGCCTTTGCAAAACTCATGAAGGGCCGCACAAGTTTCATCA
TTGCTCACCGTTTGTCAACCATTCAGGATGCGGATTTAATTCTTGTCTTAGTAGATGGTGATATTGTTGAATATGGTAAC
CATCAAGAACTCATGGATAGAAAGGGTAAGTATTACCAAATGCAAAAAGCTGCGGCTTTTAGTTCTGAATAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(24-295)

ABC transporter (ABC_tran)

(360-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZNQ2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

37.544

97.77

0.367

Multiple sequence alignment