Detailed information NTG0614247

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: LG329_RS03015
• Genome accession: NZ_CP084992
• Coordinates: 580816..583146 (-)
• Length: 776 a.a.
• NCBI ID: WP_404453152.1
• Uniprot ID: -
• Organism: Virgibacillus necropolis strain WLG-406
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 575816..588146

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LG329_RS03000 (LG329_03005)	alaS	576050..578692 (-)	2643	WP_404453146.1	alanine--tRNA ligase	-
LG329_RS03005 (LG329_03010)	-	579433..580500 (-)	1068	WP_404453148.1	AI-2E family transporter	-
LG329_RS03010 (LG329_03015)	-	580550..580738 (-)	189	WP_404453150.1	hypothetical protein	-
LG329_RS03015 (LG329_03020)	recD2	580816..583146 (-)	2331	WP_404453152.1	ATP-dependent RecD-like DNA helicase	Machinery gene
LG329_RS03020 (LG329_03025)	-	583163..583822 (-)	660	WP_404456385.1	tetratricopeptide repeat protein	-
LG329_RS03025 (LG329_03030)	mnmA	583927..585039 (-)	1113	WP_404453155.1	tRNA 2-thiouridine(34) synthase MnmA	-
LG329_RS03030 (LG329_03035)	-	585057..586202 (-)	1146	WP_404453157.1	cysteine desulfurase family protein	-
LG329_RS03035 (LG329_03040)	cymR	586230..586649 (-)	420	WP_404453160.1	cysteine metabolism transcriptional regulator CymR	-

Sequence

Protein

• Length: 776 a.a.
• Molecular weight: 87328.60 Da
• Isoelectric Point: 5.1310

>NTDB_id=614247 LG329_RS03015 WP_404453152.1 580816..583146(-) (recD2) [Virgibacillus necropolis strain WLG-406]
MTNVEQSRELEIQKYIKGELLYTIFHNATEHFSIAKIKVIDTNEELQDKEVVVKGYFSNLQEAKDYIFYGQMERHNKFGL
QYQVTSYESNIPDTKDGLIAYLSSDLFYGIGKKTASKIIEHLGENAISQILINPDVLNDVQGLKPDKAEHLVKTLQENEG
FEHVVVRLSKFGIGLKLAQKIYQVYKDESIDVLQKDPYQYVFDVEGFGFQKADEIAGINGLSLTHPNRIGAGCIYVMQKS
VQDGHVYLPVPECITRVIQLLGKTSTALDEDTVKNRLESLNTDKTMIIQNGNVYLPSLYYAEDGFASHVKRLITKPIEHE
TPLAEMMKIIGDIEEAETLSYGKEQFNAINQALHSKLMIVTGGPGTGKTTVIKGIVDAYAAIHDVSIDPKDYDNQSEYPF
VLTAPTGRAAKRLNESTGLPAVTIHRLLGWDGNSGFDKDQNEPLSGKFIIVDEFSMVDIWLANSLLKAIPDDMQVLLVGD
EDQLPSVGPGQVLSDLLASHSIPLVSLSEVYRQKEGSKIIQLAHIIKNNECTTETLQNDKDFSFLKCNEFHMIDVISKVF
SHAANKGIDLKDIQVLAPMYRSQAGITIINKTLQTIVNPKTKGRREVKVYDTIFRVGDKVLQLVNQPEDGVSNGDIGEIV
AIFFEDENKENVEQIVVTFEGKDVVYEKKDYTNIMHAYCISIHKSQGSEFPIVLLPVVSTYRRMLRKNLLYTAITRSKQS
LIICGEVQAFLQGVNTMDTNKRYTSLVRQLHDRLPNEIEKEKEGITEEEISPYDFM

Nucleotide

• Length: 2331 bp

>NTDB_id=614247 LG329_RS03015 WP_404453152.1 580816..583146(-) (recD2) [Virgibacillus necropolis strain WLG-406]
ATGACAAACGTTGAGCAATCGAGGGAACTTGAAATACAAAAATATATTAAAGGGGAGCTTCTGTACACAATTTTTCATAA
TGCTACAGAGCATTTTTCGATTGCAAAAATAAAAGTAATTGATACGAATGAAGAGCTACAGGATAAAGAAGTTGTTGTGA
AGGGTTACTTTTCCAACCTTCAAGAAGCAAAGGATTATATCTTTTATGGTCAAATGGAACGACATAATAAGTTTGGTCTC
CAATATCAAGTTACTTCTTATGAATCGAATATACCAGATACTAAGGACGGTTTAATTGCTTATTTGTCGAGCGATTTATT
TTACGGAATAGGCAAAAAAACAGCTAGTAAAATAATTGAACATCTAGGTGAAAATGCTATCTCACAAATATTAATTAATC
CAGATGTTTTAAACGATGTTCAAGGATTGAAACCAGACAAAGCTGAGCACTTAGTAAAAACATTACAAGAAAATGAAGGA
TTTGAGCATGTGGTTGTACGTTTATCTAAGTTTGGGATTGGATTAAAGCTTGCTCAGAAGATATATCAGGTTTATAAGGA
TGAATCGATAGACGTTCTTCAAAAAGACCCTTATCAATATGTATTTGATGTAGAGGGTTTCGGATTCCAAAAAGCCGATG
AAATTGCCGGCATAAATGGACTATCACTAACACATCCCAACCGGATAGGTGCTGGGTGCATATATGTCATGCAAAAAAGT
GTACAGGATGGCCATGTATATTTACCTGTCCCCGAATGTATAACACGCGTAATTCAGTTATTAGGAAAAACAAGTACTGC
GTTAGATGAGGATACCGTCAAAAATCGATTGGAATCATTAAATACAGATAAAACAATGATTATTCAAAATGGGAACGTCT
ATTTACCTTCTTTGTATTATGCAGAGGATGGCTTTGCTTCGCATGTGAAGCGGTTAATTACGAAGCCTATCGAACACGAG
ACTCCGTTAGCAGAGATGATGAAAATTATTGGCGATATTGAAGAAGCGGAAACATTAAGCTATGGGAAAGAACAATTCAA
TGCTATTAATCAAGCATTACATTCCAAATTAATGATTGTCACAGGTGGACCTGGAACAGGGAAAACTACAGTAATAAAAG
GTATTGTTGATGCTTATGCAGCTATTCATGATGTTTCTATTGATCCAAAAGATTATGATAATCAATCTGAGTATCCCTTT
GTTTTAACGGCACCAACCGGCCGTGCGGCAAAACGCTTAAATGAATCAACTGGACTTCCTGCAGTTACCATCCATCGATT
ACTAGGTTGGGATGGAAATAGTGGATTTGATAAAGATCAAAACGAGCCATTGTCAGGAAAGTTCATAATCGTCGATGAAT
TTTCAATGGTAGATATTTGGCTTGCTAATAGTCTGTTAAAAGCAATTCCAGATGACATGCAAGTCTTACTAGTTGGTGAT
GAGGATCAGTTGCCTTCCGTTGGGCCAGGACAGGTTCTCTCTGACTTATTAGCGAGTCACTCCATTCCACTAGTAAGTCT
AAGTGAGGTATATAGACAAAAAGAAGGGTCTAAGATAATTCAACTAGCCCATATTATAAAAAACAATGAATGTACGACAG
AGACCCTCCAAAATGATAAGGACTTTAGCTTTCTTAAATGTAATGAATTCCATATGATTGATGTAATTTCAAAAGTATTT
TCCCATGCAGCTAATAAAGGTATTGATCTAAAGGATATTCAGGTATTAGCGCCAATGTATCGCTCGCAAGCCGGGATTAC
GATTATTAATAAAACACTTCAAACAATTGTAAATCCAAAAACCAAAGGCAGACGGGAAGTGAAAGTATACGATACAATTT
TCCGGGTTGGAGATAAAGTGCTCCAATTGGTCAATCAGCCTGAAGATGGCGTTTCAAATGGGGATATTGGAGAAATTGTT
GCAATCTTTTTTGAGGATGAAAATAAAGAAAATGTTGAGCAAATTGTTGTAACATTTGAGGGAAAAGATGTTGTGTATGA
GAAAAAGGATTATACAAACATCATGCATGCTTATTGTATTTCCATCCATAAATCACAAGGAAGTGAGTTTCCAATTGTCT
TGTTGCCAGTTGTGTCCACATACCGTCGAATGCTACGTAAAAATTTATTATATACAGCCATTACGAGAAGCAAACAATCT
TTAATCATATGCGGGGAAGTACAAGCATTTTTACAAGGTGTAAATACAATGGATACAAACAAACGATACACCAGTCTAGT
AAGGCAATTACACGACCGATTACCGAATGAAATAGAAAAAGAAAAGGAAGGCATTACTGAAGAGGAAATTTCTCCGTATG
ATTTTATGTAA

Domains

Predicted by InterproScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (676-724)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (589-659)

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-247)

• AAA domain (AAA_30) (341-546)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	48.473	100	0.491