Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrQ   Type   Regulator
Locus tag   NPS18_RS04270 Genome accession   NZ_CP101984
Coordinates   860841..862613 (+) Length   590 a.a.
NCBI ID   WP_002262898.1    Uniprot ID   Q8DUL5
Organism   Streptococcus mutans strain UA-159     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 855841..867613
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NPS18_RS04260 (NPS18_04260) - 856769..858637 (+) 1869 WP_002262895.1 ABC-F family ATP-binding cassette domain-containing protein -
  NPS18_RS04265 (NPS18_04265) rcrP 859094..860830 (+) 1737 WP_002262897.1 ABC transporter ATP-binding protein Regulator
  NPS18_RS04270 (NPS18_04270) rcrQ 860841..862613 (+) 1773 WP_002262898.1 ABC transporter ATP-binding protein Regulator
  NPS18_RS04275 (NPS18_04275) - 862729..863649 (+) 921 WP_002262899.1 AEC family transporter -

Sequence


Protein


Download         Length: 590 a.a.        Molecular weight: 66866.58 Da        Isoelectric Point: 6.8935

>NTDB_id=613608 NPS18_RS04270 WP_002262898.1 860841..862613(+) (rcrQ) [Streptococcus mutans strain UA-159]
MKKKTVFLRLWYYLKTYKGSLFLAIFLKILSSVMNVLEPFILGLVMTELTANLIDMARGVQGAHLNIRYITMILFLYFLR
GLLYSIGSYGSNYFMTNAVQKSIYDLRHDLSEKINKIPVSYFDKHQFGDMLGRFTNDVETVSNALQQSFLQIINAFLTII
LVVVMVLYLNLTLAAIILVCIPLTYFSSHFILRKSQPYFKKQANALGDMNSFVQENLTGFNVIKLYGREEISAETFRTIT
ENLRDVGFKASFISGIMMPVLNAISDLAYLIVALVGGLQVLAGRLTIGNMQAFVQYIWQINQPIQTITQLSSVLQSAKSS
LERIFEVLDETDEVNQVKEKLEHDLTGQVTFHNVAFQYTEDKPLIRHFDLDVKPGQMIAVVGPTGAGKTTLINLLMRFYD
VTQGAITVDNHDIRNLSRQEYRKQFGMVLQDAWLYEGTIKDNLRFGNLQASDEEIVEAAKAANVDHFIRTLPDGYNMEVN
QESNNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMSKLMEGRTSFVIAHRLSTIQEADKILVLKDGQ
IIEQGNHQSLLADKGFYYDLYMSQFSAKTN

Nucleotide


Download         Length: 1773 bp        

>NTDB_id=613608 NPS18_RS04270 WP_002262898.1 860841..862613(+) (rcrQ) [Streptococcus mutans strain UA-159]
ATGAAAAAGAAAACTGTCTTTTTACGCTTATGGTATTATTTGAAAACCTATAAAGGTTCACTCTTTTTGGCTATTTTTTT
AAAAATACTTAGCAGTGTCATGAATGTCCTTGAGCCTTTTATTTTAGGACTGGTAATGACAGAATTAACGGCTAACTTAA
TTGATATGGCTCGCGGAGTTCAAGGCGCTCATCTCAATATCAGATATATTACCATGATTTTATTTCTTTATTTTTTACGT
GGCTTGCTGTATAGTATTGGCTCTTACGGTTCTAATTACTTTATGACTAATGCAGTGCAAAAAAGCATTTACGATTTGCG
TCATGATTTGAGTGAAAAGATTAATAAGATTCCCGTTTCTTATTTTGATAAACATCAATTTGGCGATATGTTAGGACGTT
TCACTAATGACGTTGAAACAGTCTCCAACGCTTTACAGCAGAGCTTTCTGCAGATTATTAATGCTTTTTTGACAATTATC
CTTGTTGTGGTTATGGTGCTTTACCTCAATTTGACTCTGGCGGCGATTATTCTTGTTTGTATTCCGCTGACTTATTTCAG
TTCTCATTTTATTTTAAGGAAATCACAGCCTTATTTTAAAAAACAGGCTAATGCTTTAGGGGATATGAACAGTTTCGTTC
AGGAAAACTTAACGGGCTTTAATGTCATAAAACTCTATGGACGTGAAGAAATATCTGCTGAAACCTTTCGAACTATCACA
GAAAATTTACGAGATGTCGGCTTTAAAGCCAGTTTTATTTCTGGAATAATGATGCCAGTTCTTAATGCTATCTCAGACTT
AGCTTATTTGATTGTTGCATTAGTTGGCGGCCTGCAGGTCTTAGCAGGGAGACTGACTATTGGTAATATGCAGGCCTTTG
TTCAATACATTTGGCAAATCAATCAGCCTATTCAGACCATCACACAATTATCAAGTGTTCTTCAAAGTGCTAAATCTTCT
CTAGAACGTATTTTTGAGGTTTTGGATGAAACAGATGAAGTCAATCAAGTCAAGGAAAAGCTGGAACATGATTTGACAGG
GCAAGTGACCTTTCATAATGTCGCCTTTCAATATACTGAAGATAAGCCTTTAATTCGACATTTTGATTTAGATGTTAAAC
CGGGTCAGATGATTGCTGTTGTTGGTCCGACCGGGGCGGGTAAGACAACTCTTATCAATCTTTTGATGCGTTTTTATGAT
GTTACCCAAGGAGCGATTACAGTAGATAATCATGATATCCGTAACCTTTCCCGTCAGGAATATCGGAAACAATTTGGGAT
GGTTCTTCAAGATGCTTGGTTATATGAAGGGACGATCAAAGACAATTTGCGCTTTGGAAATTTGCAGGCAAGTGATGAGG
AAATTGTCGAAGCAGCCAAGGCAGCTAATGTCGATCATTTTATCCGAACCCTTCCAGACGGTTATAATATGGAAGTCAAT
CAAGAATCTAATAATATTTCTTTGGGGCAAAAGCAATTGTTAACCATAGCACGAGCGCTGCTGGCTGATCCCAAAATTCT
GATTCTGGATGAAGCGACTTCTTCAGTTGATACTCGTTTGGAACTTCTCATTCAAAAAGCTATGAGTAAGCTTATGGAAG
GCCGCACTAGCTTTGTTATTGCTCATCGTCTTTCAACTATCCAAGAAGCCGATAAGATCCTTGTCCTTAAGGATGGTCAA
ATTATTGAACAGGGGAACCATCAAAGTCTCTTAGCTGACAAGGGCTTCTATTATGATTTGTATATGAGTCAGTTTAGCGC
TAAAACCAATTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q8DUL5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

45.025

100

0.453