Detailed information NTG0612918

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: NP433_RS13745
• Genome accession: NZ_CP101930
• Coordinates: 2666433..2667698 (+)
• Length: 421 a.a.
• NCBI ID: WP_015714437.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain BGSC 10A5
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2661433..2672698

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NP433_RS13725 (NP433_13725)	yrrB	2662804..2663424 (-)	621	WP_211197310.1	tetratricopeptide repeat protein	-
NP433_RS13730 (NP433_13730)	mnmA	2663510..2664625 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
NP433_RS13735 (NP433_13735)	iscSA	2664656..2665795 (-)	1140	WP_014480425.1	cysteine desulfurase family protein	-
NP433_RS13740 (NP433_13740)	cymR	2665814..2666230 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
NP433_RS13745 (NP433_13745)	rarA	2666433..2667698 (+)	1266	WP_015714437.1	replication-associated recombination protein A	Machinery gene
NP433_RS13750 (NP433_13750)	tcdA	2667738..2668502 (-)	765	WP_080529619.1	ThiF family adenylyltransferase	-
NP433_RS13760 (NP433_13760)	aspS	2668838..2670616 (-)	1779	WP_256682912.1	aspartate--tRNA ligase	-
NP433_RS13765 (NP433_13765)	hisS	2670630..2671904 (-)	1275	WP_014480430.1	histidine--tRNA ligase	-
NP433_RS13770 (NP433_13770)	yrzK	2672285..2672455 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46500.35 Da
• Isoelectric Point: 7.2043

>NTDB_id=612918 NP433_RS13745 WP_015714437.1 2666433..2667698(+) (rarA) [Bacillus subtilis strain BGSC 10A5]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=612918 NP433_RS13745 WP_015714437.1 2666433..2667698(+) (rarA) [Bacillus subtilis strain BGSC 10A5]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCTAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAATGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGTGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAATTCGAATCCGCCTTAAAGCAGGTGTATGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.762	100	0.998