Detailed information NTG0610034

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: NMT99_RS14020
• Genome accession: NZ_CP101290
• Coordinates: 2684933..2686198 (+)
• Length: 421 a.a.
• NCBI ID: WP_015714437.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain LjM2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2679933..2691198

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NMT99_RS14000	yrrB	2681304..2681924 (-)	621	WP_211197310.1	tetratricopeptide repeat protein	-
NMT99_RS14005	mnmA	2682010..2683125 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
NMT99_RS14010	iscSA	2683153..2684295 (-)	1143	WP_003229769.1	cysteine desulfurase family protein	-
NMT99_RS14015	cymR	2684314..2684730 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
NMT99_RS14020	rarA	2684933..2686198 (+)	1266	WP_015714437.1	replication-associated recombination protein A	Machinery gene
NMT99_RS14025	tcdA	2686238..2687002 (-)	765	WP_014480428.1	ThiF family adenylyltransferase	-
NMT99_RS14035	aspS	2687337..2689115 (-)	1779	WP_003229758.1	aspartate--tRNA ligase	-
NMT99_RS14040	hisS	2689129..2690403 (-)	1275	WP_003229755.1	histidine--tRNA ligase	-
NMT99_RS14045	yrzK	2690785..2690955 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46500.35 Da
• Isoelectric Point: 7.2043

>NTDB_id=610034 NMT99_RS14020 WP_015714437.1 2684933..2686198(+) (rarA) [Bacillus subtilis strain LjM2]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=610034 NMT99_RS14020 WP_015714437.1 2684933..2686198(+) (rarA) [Bacillus subtilis strain LjM2]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GTCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.762	100	0.998