Detailed information NTG0609517

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: Dongsha4_RS02930
• Genome accession: NZ_CP084098
• Coordinates: 668332..669447 (+)
• Length: 371 a.a.
• NCBI ID: WP_330204269.1
• Uniprot ID: -
• Organism: Cyanobacterium sp. Dongsha4
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 663332..674447

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Dongsha4_RS02905 (Dongsha4_02920)	-	663580..664815 (+)	1236	WP_330204264.1	DUF4336 domain-containing protein	-
Dongsha4_RS02910 (Dongsha4_02925)	-	664843..665511 (-)	669	WP_330204265.1	methyltransferase domain-containing protein	-
Dongsha4_RS02915 (Dongsha4_02930)	nrtS	665783..666028 (-)	246	WP_330204266.1	nitrate/nitrite transporter NrtS	-
Dongsha4_RS02920 (Dongsha4_02935)	-	666027..666467 (+)	441	WP_330204267.1	hypothetical protein	-
Dongsha4_RS02925 (Dongsha4_02940)	-	666623..667954 (-)	1332	WP_330204268.1	sugar ABC transporter substrate-binding protein	-
Dongsha4_RS02930 (Dongsha4_02945)	pilM	668332..669447 (+)	1116	WP_330204269.1	type IV pilus assembly protein PilM	Machinery gene
Dongsha4_RS02935 (Dongsha4_02950)	-	669450..670310 (+)	861	WP_330204270.1	PilN domain-containing protein	-
Dongsha4_RS02940 (Dongsha4_02955)	-	670307..671062 (+)	756	WP_330204271.1	type II and III secretion system protein	-
Dongsha4_RS02945 (Dongsha4_02960)	-	671157..673385 (+)	2229	WP_330204272.1	type II and III secretion system protein	-
Dongsha4_RS02950 (Dongsha4_02965)	-	673500..673754 (-)	255	WP_330204273.1	DUF3146 family protein	-

Sequence

Protein

• Length: 371 a.a.
• Molecular weight: 41150.41 Da
• Isoelectric Point: 4.2904

>NTDB_id=609517 Dongsha4_RS02930 WP_330204269.1 668332..669447(+) (pilM) [Cyanobacterium sp. Dongsha4]
MLSFLDNFMGGKTNGVGIEISPDKVTLAQIAKKGQQYKLLKYYSLEVPEEIFEEGQIVDSPALAELIDQLVKEAKVKPKQ
IATAVPMKDAVMRIIPIPAELNDQELRDMVLNHEAALYLPYPRDEVDIDYQKLGYFVDEDGIEKVQVLLVATRREVTDLY
LETFQQAGLKVSVLEINSFALIRTIKEQLKQFSSSEAVVLVDIEFDTTEIAIICEGVPQFTRTIPIGTYQMQTALAQAMN
LPTSKNTELLQEITIPNNPEQTTSASTTSSQTWINPGMDSLLRVLGELVDELRRSINFYLNQSGDVEVVQMLLSGPGAGL
AQIDEFFTKKLSLPTMQVDPISALSLSLKEDLSPMQRAGLGTVLGLGMRMS

Nucleotide

• Length: 1116 bp

>NTDB_id=609517 Dongsha4_RS02930 WP_330204269.1 668332..669447(+) (pilM) [Cyanobacterium sp. Dongsha4]
ATGTTAAGTTTTTTAGACAACTTCATGGGGGGGAAAACCAACGGTGTCGGTATTGAAATCAGTCCCGATAAAGTTACCCT
TGCTCAAATTGCTAAAAAAGGTCAACAATACAAACTACTCAAGTACTATTCTTTAGAAGTGCCAGAAGAAATATTTGAGG
AAGGACAAATAGTTGATTCTCCCGCATTAGCTGAATTGATTGATCAACTGGTTAAAGAGGCAAAGGTCAAACCAAAACAA
ATTGCTACTGCCGTACCCATGAAAGATGCAGTTATGCGTATTATACCAATTCCTGCCGAATTAAATGATCAGGAATTAAG
AGACATGGTACTTAACCATGAAGCCGCTTTATATCTACCTTATCCTAGAGACGAAGTGGATATAGATTATCAAAAATTAG
GCTACTTTGTGGATGAGGATGGCATAGAAAAAGTACAGGTTTTGTTAGTTGCCACTAGAAGAGAAGTAACTGATTTATAC
CTAGAAACATTCCAACAGGCAGGATTGAAAGTAAGTGTTCTGGAAATCAATAGTTTTGCTTTAATTAGAACTATAAAAGA
GCAACTCAAACAATTTTCTTCCAGCGAAGCGGTGGTTTTAGTGGATATTGAGTTTGATACTACTGAAATTGCCATTATCT
GTGAAGGTGTACCCCAATTCACCCGTACAATCCCCATTGGCACATATCAAATGCAAACAGCTTTGGCTCAAGCAATGAAT
TTGCCCACCTCCAAAAACACAGAACTATTACAGGAAATCACTATTCCCAATAATCCAGAACAAACCACCAGCGCTAGTAC
CACTAGCAGTCAAACTTGGATAAACCCCGGCATGGACTCTTTATTAAGGGTTTTAGGTGAATTAGTGGATGAGTTGCGTC
GCTCTATTAATTTCTATCTCAATCAGAGTGGAGATGTGGAAGTGGTGCAAATGCTTTTGTCTGGCCCAGGAGCAGGTTTA
GCACAAATTGACGAGTTTTTCACCAAAAAATTGAGTTTACCAACGATGCAAGTTGACCCTATTTCAGCTTTATCTCTAAG
TTTGAAAGAGGATTTATCCCCAATGCAAAGGGCAGGATTAGGTACTGTACTTGGTTTAGGAATGAGGATGAGCTAG

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (17-245)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Synechocystis sp. PCC 6803	64.865	99.73	0.647