Detailed information NTG0060809

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: KE3_RS01355
• Genome accession: NC_021900
• Coordinates: 269098..270030 (+)
• Length: 310 a.a.
• NCBI ID: WP_020916180.1
• Uniprot ID: A0AB33AJN5
• Organism: Streptococcus lutetiensis 033
• Function: internalize XIP (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	270361..271149	269098..270030	flank	331

Gene organization within MGE regions

Location: 269098..271149

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KE3_RS01355 (KE3_0277)	amiF	269098..270030 (+)	933	WP_020916180.1	ABC transporter ATP-binding protein	Regulator
KE3_RS01360 (KE3_0278)	-	270196..271149 (-)	954	Protein_265	IS30 family transposase	-

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 34995.88 Da
• Isoelectric Point: 6.2506

>NTDB_id=60809 KE3_RS01355 WP_020916180.1 269098..270030(+) (amiF) [Streptococcus lutetiensis 033]
MTENRKKLVELKNVSLTFNEGKKNEVKAINNVSFDIYEGEVFGLVGESGSGKTTVGRAILKLYDISGGEIDFNGETVSNL
KGKKLHEFRKNVQMIFQDPQASLNARMKIRDIVAEGLDIHKLVNSKEERDEKVQELLSLVGLNKDHMTRYPHEFSGGQRQ
RIGIARALAVQPKFIIADEPISALDVSIQAQVVNLMKKLQREKGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSED
VYNNPIHPYTKSLLSAIPEPDPESERERVHQAYDPSAELDGQEREMREITPGHFVLSTEAEAEEYKKALS

Nucleotide

• Length: 933 bp

>NTDB_id=60809 KE3_RS01355 WP_020916180.1 269098..270030(+) (amiF) [Streptococcus lutetiensis 033]
ATGACTGAAAATAGAAAAAAGCTTGTTGAACTTAAAAATGTCTCTTTGACTTTCAACGAAGGCAAAAAGAATGAAGTAAA
AGCTATCAACAACGTCAGCTTCGATATCTATGAAGGTGAAGTCTTTGGTCTAGTTGGTGAATCAGGTTCTGGTAAAACAA
CTGTTGGACGTGCTATTTTAAAACTTTACGATATTAGTGGTGGTGAAATCGACTTTAACGGAGAAACGGTTTCTAACCTT
AAAGGTAAAAAACTACATGAATTCCGTAAAAATGTCCAAATGATTTTCCAAGATCCACAAGCCAGTCTTAATGCACGTAT
GAAAATCCGTGATATCGTTGCTGAAGGTCTTGATATTCACAAACTTGTTAATAGTAAAGAAGAACGTGATGAAAAAGTTC
AAGAATTGCTTTCTCTAGTAGGTTTGAACAAAGATCACATGACTCGTTACCCACACGAATTTTCTGGTGGTCAACGTCAA
CGTATTGGTATTGCACGTGCTCTTGCTGTACAACCAAAATTCATTATTGCTGATGAACCAATTTCTGCGCTTGACGTGTC
TATTCAAGCTCAAGTTGTTAATTTGATGAAAAAACTTCAACGCGAAAAAGGCTTAACTTACCTCTTCATCGCTCACGATT
TGTCAATGGTTAAATACATTTCAGATCGTATTGGAGTTATGCACTGGGGTAAAATGCTTGAAATTGGAACATCTGAAGAT
GTTTACAACAATCCAATTCACCCATATACTAAAAGTCTGTTGTCTGCAATTCCAGAACCAGATCCAGAATCTGAACGTGA
ACGTGTACACCAAGCTTATGATCCAAGTGCAGAACTTGATGGTCAAGAACGTGAAATGCGTGAAATCACACCAGGACATT
TTGTACTTTCTACAGAAGCAGAAGCAGAAGAATACAAAAAAGCATTATCATAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (30-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	56.026	99.032	0.555
amiF	Streptococcus thermophilus LMG 18311	55.7	99.032	0.552
amiF	Streptococcus salivarius strain HSISS4	55.375	99.032	0.548