Detailed information NTG0060488

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: HK91_RS06950
• Genome accession: NC_021840
• Coordinates: 1392557..1394953 (-)
• Length: 798 a.a.
• NCBI ID: WP_003741024.1
• Uniprot ID: -
• Organism: Listeria monocytogenes
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1387557..1399953

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HK91_RS06930 (M645_07030)	-	1388023..1388718 (-)	696	WP_003725979.1	ABC transporter ATP-binding protein	-
HK91_RS06935 (M645_07035)	-	1388727..1390226 (-)	1500	WP_003725980.1	ABC transporter permease	-
HK91_RS06940 (M645_07040)	pieR	1390393..1391079 (+)	687	WP_003725981.1	two component system response regulator PieR	-
HK91_RS06945 (M645_07045)	pieS	1391076..1392515 (+)	1440	WP_003741021.1	two component system sensor histidine kinase PieS	-
HK91_RS06950 (M645_07050)	recD2	1392557..1394953 (-)	2397	WP_003741024.1	ATP-dependent RecD-like DNA helicase	Machinery gene
HK91_RS06955 (M645_07055)	-	1394981..1395619 (-)	639	WP_072572675.1	tetratricopeptide repeat protein	-
HK91_RS06960 (M645_07060)	-	1395660..1396400 (-)	741	WP_003725985.1	alpha/beta hydrolase	-
HK91_RS06965 (M645_07065)	mnmA	1396519..1397634 (-)	1116	WP_003727410.1	tRNA 2-thiouridine(34) synthase MnmA	-
HK91_RS06970 (M645_07070)	-	1397653..1398801 (-)	1149	WP_003731166.1	cysteine desulfurase family protein	-

Sequence

Protein

• Length: 798 a.a.
• Molecular weight: 90103.20 Da
• Isoelectric Point: 4.8081

>NTDB_id=60488 HK91_RS06950 WP_003741024.1 1392557..1394953(-) (recD2) [Listeria monocytogenes]
MAEQESLALFNDTPEELFMKGTMLSTIFYNAENLFSVVRILVKETNADWDEKDIIVTGFFPALHEQEVYTFYGKMQEHAK
FGQQFKADRFRKEMPQSRAGLINYLSGELFKGIGKVTAENIVDTIGDDAITKILSDPSLLNTVPKLPSGAAESLLASLRE
NQGLEHVMVGLNEYGFGPQLSMKIFQAYKQNAIEVLENNPYKLIEDIKGIGFQRADELGRKLGLGGNHPERLRAGILFML
DSVCMQQGHVYMEQEVLLGEVTYLLEESEGIRIDQNILVAQVEKLAEEQKIITENTRVYMPSLYYSESGFAYHVKRMLKQ
TEYQEQFPQSEFLLALGELEERIGVHYGDSQRQALEQALMSPMLVLTGGPGTGKTTVIKGIVELYAELNGVSLDPHAYKD
GATFPVLLAAPTGRAAKRMSESTGLPAMTIHRLLGMNGQEQMDDDAERLIDGRLLIVDEMSMVDIWLANQLFRALPAHMQ
VVLVGDQDQLPSVGPGQVLKDILQSEQIPTVALSDIYRQKDGSSIIEMAHYIKEGMLPADFTKNSADRSFFHCTVNQIGD
VVEQVVKNAKNKGFRAKDIQVLAPMYRGPAGIDILNKKLQEIFNPNDTGRRKEVQFGDIKYRVHDKVLQLINQPEKNVFN
GDIGEIVSIIYAKENTEKQDLIVVQFDQTEVSYYRQEFNQLTHAYCCSIHKAQGSEFPIVIMPIVRSYYRMLRRDLIYTG
VTRSKQFLILCGEEEAFRMGIERIDENKRNTTLSERLMSEDVLLEQMTNKRILTAENITEIDPMIGMEGITPEQFMAG

Nucleotide

• Length: 2397 bp

>NTDB_id=60488 HK91_RS06950 WP_003741024.1 1392557..1394953(-) (recD2) [Listeria monocytogenes]
ATGGCTGAACAAGAATCACTCGCTCTATTTAACGATACACCAGAAGAACTTTTCATGAAGGGCACGATGTTGTCCACCAT
TTTTTACAATGCCGAAAACCTCTTTTCTGTTGTACGAATATTGGTCAAAGAAACCAATGCGGATTGGGACGAAAAAGATA
TTATCGTAACCGGTTTTTTCCCAGCGCTTCACGAGCAAGAAGTATACACTTTCTACGGGAAAATGCAGGAACATGCTAAA
TTTGGTCAACAGTTTAAAGCAGACCGGTTTCGTAAGGAAATGCCACAATCACGAGCGGGCTTAATTAATTATCTATCCGG
TGAACTTTTTAAAGGCATTGGTAAAGTCACTGCTGAAAATATTGTGGATACGATTGGCGACGATGCTATCACAAAAATTT
TATCCGATCCGAGCTTGCTAAATACAGTACCTAAGTTGCCATCTGGCGCGGCAGAAAGTTTGCTTGCTTCCCTTAGAGAA
AATCAAGGGTTGGAGCATGTGATGGTCGGATTAAACGAATATGGCTTTGGTCCGCAATTATCCATGAAAATTTTCCAGGC
CTATAAACAAAATGCGATTGAAGTGTTAGAGAATAATCCTTATAAATTGATTGAGGATATAAAAGGGATTGGTTTTCAGC
GTGCCGATGAGCTTGGACGGAAACTCGGTCTTGGCGGGAATCATCCAGAACGGCTTCGTGCTGGGATTTTATTTATGTTA
GATTCGGTTTGTATGCAACAAGGTCATGTATATATGGAGCAAGAGGTTCTGCTCGGAGAAGTAACTTATTTACTGGAAGA
AAGCGAAGGCATTCGTATTGACCAAAATATTTTAGTAGCTCAAGTAGAAAAATTAGCTGAGGAACAAAAGATTATTACGG
AAAATACACGTGTTTACATGCCATCACTCTATTATTCAGAGAGCGGCTTTGCATATCACGTGAAGCGAATGCTTAAACAA
ACAGAATACCAAGAACAATTTCCGCAATCCGAATTTCTGCTAGCTCTAGGAGAATTAGAAGAACGGATTGGCGTTCACTA
CGGAGATTCGCAGCGACAGGCTTTAGAACAAGCTTTAATGTCTCCGATGCTCGTACTTACTGGTGGTCCCGGGACAGGGA
AAACAACAGTCATTAAAGGGATAGTGGAGCTTTATGCGGAACTAAATGGTGTGAGCCTTGATCCCCATGCTTACAAAGAT
GGAGCGACTTTCCCCGTTCTTCTTGCTGCTCCAACTGGCCGTGCCGCTAAACGGATGTCTGAGTCAACAGGGCTTCCTGC
GATGACCATTCACCGTTTACTTGGAATGAATGGTCAAGAACAAATGGATGATGATGCAGAAAGACTGATTGATGGACGAC
TGTTGATAGTGGATGAGATGTCAATGGTAGATATTTGGCTTGCTAATCAATTATTCCGTGCTTTACCAGCGCACATGCAA
GTGGTACTTGTTGGCGACCAAGATCAGTTGCCTTCAGTCGGACCAGGTCAAGTACTCAAAGATATTCTGCAATCTGAACA
AATTCCAACTGTAGCTCTTTCAGATATTTACCGCCAAAAGGATGGTTCTTCCATTATCGAAATGGCGCATTATATAAAAG
AAGGCATGTTGCCAGCTGATTTCACCAAAAATAGCGCCGATCGCTCCTTTTTTCATTGCACGGTAAATCAAATTGGTGAT
GTAGTCGAACAAGTGGTAAAAAATGCAAAAAACAAAGGATTTCGAGCAAAAGACATCCAAGTTTTAGCACCAATGTATCG
TGGTCCTGCAGGCATTGATATTTTAAATAAAAAACTACAAGAAATTTTCAATCCAAATGATACAGGGCGTCGTAAAGAAG
TTCAATTTGGTGACATAAAGTATCGCGTGCATGACAAAGTACTGCAATTGATTAATCAACCAGAGAAAAATGTGTTTAAC
GGTGATATTGGTGAAATTGTGTCTATTATATACGCCAAAGAAAATACCGAAAAACAAGATCTGATTGTCGTTCAATTTGA
CCAAACAGAGGTTTCTTACTATAGGCAAGAATTTAATCAATTGACCCATGCTTATTGTTGTTCGATCCATAAAGCGCAGG
GAAGTGAATTTCCGATTGTGATTATGCCGATTGTCCGCAGTTACTACCGGATGTTACGGCGCGATTTAATATACACCGGA
GTAACGCGAAGTAAACAATTTCTCATTCTTTGCGGGGAAGAAGAAGCTTTTCGAATGGGGATAGAACGAATTGATGAAAA
TAAACGTAATACAACACTCTCTGAACGTTTAATGAGCGAAGATGTTTTATTAGAACAAATGACAAATAAACGAATTCTCA
CAGCTGAAAATATTACGGAAATTGATCCGATGATTGGAATGGAAGGGATTACTCCAGAACAATTTATGGCAGGATAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (595-666)

• Helix-hairpin-helix containing domain (HHH_RecD2) (160-251)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (683-731)

• AAA domain (AAA_30) (347-554)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	57.107	98.747	0.564