Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   NKZ80_RS02545 Genome accession   NZ_CP100330
Coordinates   491379..492113 (+) Length   244 a.a.
NCBI ID   WP_002943067.1    Uniprot ID   A0A0H3MU26
Organism   Streptococcus suis strain STC85     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 486379..497113
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NKZ80_RS02520 (NKZ80_02520) - 486879..487187 (-) 309 WP_002938710.1 DUF1827 family protein -
  NKZ80_RS02525 (NKZ80_02525) - 487242..487703 (-) 462 WP_002938708.1 NUDIX hydrolase -
  NKZ80_RS02530 (NKZ80_02530) clpE 487889..490117 (-) 2229 WP_254369375.1 ATP-dependent Clp protease ATP-binding subunit Regulator
  NKZ80_RS02535 (NKZ80_02535) - 490341..490571 (+) 231 WP_002938704.1 DUF1797 family protein -
  NKZ80_RS02540 (NKZ80_02540) - 490697..491386 (+) 690 WP_002938702.1 amino acid ABC transporter permease -
  NKZ80_RS02545 (NKZ80_02545) amiE 491379..492113 (+) 735 WP_002943067.1 amino acid ABC transporter ATP-binding protein Regulator
  NKZ80_RS02550 (NKZ80_02550) - 492243..493091 (+) 849 WP_015646548.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -
  NKZ80_RS02555 (NKZ80_02555) - 494530..494823 (+) 294 WP_002938694.1 hypothetical protein -
  NKZ80_RS02560 (NKZ80_02560) lepB 494813..495415 (+) 603 WP_032499189.1 signal peptidase I -
  NKZ80_RS02565 (NKZ80_02565) - 495434..495820 (+) 387 WP_024417621.1 hypothetical protein -
  NKZ80_RS02570 (NKZ80_02570) - 495821..496210 (-) 390 Protein_454 transposase -
  NKZ80_RS02575 (NKZ80_02575) - 496178..497005 (+) 828 WP_022540576.1 class C sortase -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 26881.11 Da        Isoelectric Point: 4.7252

>NTDB_id=604207 NKZ80_RS02545 WP_002943067.1 491379..492113(+) (amiE) [Streptococcus suis strain STC85]
MSNAIISIKDLHKYFGKNEVLKGIDLDIQQGQVVVIIGPSGSGKSTFLRTMNLLEVPTKGTVTFEGVDITDKSNDIFKMR
EKMGMVFQQFNLFPNMTVLDNITLSPIKTKGIAKDEAEKKAKELLEKVGLPDKANAYPQSLSGGQQQRIAIARGLAMDPD
VLLFDEPTSALDPEMVGEVLAVMQDLAKSGMTMVIVTHEMGFAREVADRVIFMDGGVIVEDGTPEEVFEHTKEERTKDFL
SKVL

Nucleotide


Download         Length: 735 bp        

>NTDB_id=604207 NKZ80_RS02545 WP_002943067.1 491379..492113(+) (amiE) [Streptococcus suis strain STC85]
ATGTCTAATGCGATTATTTCTATCAAGGATTTACATAAGTACTTCGGAAAGAATGAGGTTCTAAAAGGAATTGATTTAGA
TATTCAACAAGGTCAGGTTGTCGTTATTATCGGTCCATCAGGGTCAGGGAAATCGACTTTCTTACGTACAATGAACCTCT
TAGAAGTGCCAACCAAGGGAACTGTTACATTTGAAGGTGTTGATATTACTGACAAGTCAAATGATATTTTCAAGATGCGT
GAAAAGATGGGAATGGTTTTTCAACAGTTCAATCTTTTTCCGAATATGACGGTATTAGATAATATTACTTTATCACCTAT
TAAGACAAAGGGAATTGCAAAGGATGAGGCTGAGAAGAAGGCAAAGGAATTACTTGAAAAGGTAGGATTGCCAGATAAGG
CGAATGCCTATCCACAAAGCCTTTCAGGTGGTCAGCAACAGCGAATCGCTATTGCACGTGGTCTGGCTATGGACCCAGAT
GTCCTACTTTTTGATGAACCGACCTCTGCACTAGACCCTGAAATGGTTGGTGAAGTTCTTGCTGTTATGCAGGATTTGGC
CAAGTCAGGGATGACCATGGTTATCGTGACTCATGAGATGGGATTTGCGCGTGAGGTAGCTGACAGGGTTATCTTTATGG
ATGGCGGTGTCATCGTGGAGGATGGAACGCCTGAAGAAGTCTTTGAACATACCAAGGAAGAACGGACCAAGGATTTCTTG
TCTAAGGTCTTGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(21-169)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3MU26

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

34.496

100

0.365
  amiE Streptococcus thermophilus LMG 18311

34.496

100

0.365
  amiE Streptococcus thermophilus LMD-9

34.496

100

0.365