Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   NKZ80_RS01255 Genome accession   NZ_CP100330
Coordinates   226590..228923 (+) Length   777 a.a.
NCBI ID   WP_024417441.1    Uniprot ID   -
Organism   Streptococcus suis strain STC85     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 221590..233923
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NKZ80_RS01235 (NKZ80_01235) treP 222186..224180 (-) 1995 WP_002935953.1 PTS system trehalose-specific EIIBC component -
  NKZ80_RS01240 (NKZ80_01240) treR 224413..225126 (+) 714 WP_012774930.1 trehalose operon repressor Regulator
  NKZ80_RS01245 (NKZ80_01245) - 225184..225495 (+) 312 WP_002935948.1 hypothetical protein -
  NKZ80_RS01250 (NKZ80_01250) - 225492..226040 (+) 549 WP_002935945.1 CvpA family protein -
  NKZ80_RS01255 (NKZ80_01255) mutS/mutS2 226590..228923 (+) 2334 WP_024417441.1 endonuclease MutS2 Machinery gene
  NKZ80_RS01260 (NKZ80_01260) - 229089..229469 (+) 381 WP_002935927.1 DUF1310 family protein -
  NKZ80_RS01265 (NKZ80_01265) - 229476..230738 (+) 1263 WP_002935926.1 triacylglycerol lipase -
  NKZ80_RS01270 (NKZ80_01270) - 230717..231103 (+) 387 WP_002935925.1 hypothetical protein -
  NKZ80_RS01275 (NKZ80_01275) - 231116..231436 (+) 321 WP_002935924.1 hypothetical protein -
  NKZ80_RS01280 (NKZ80_01280) trxA 231833..232147 (+) 315 WP_002935923.1 thioredoxin -
  NKZ80_RS11330 - 232240..232290 (-) 51 WP_353735889.1 hypothetical protein -
  NKZ80_RS01285 (NKZ80_01285) - 232280..233809 (+) 1530 WP_009909192.1 AMP-binding protein -

Sequence

Protein


Download         Length: 777 a.a.        Molecular weight: 87552.27 Da        Isoelectric Point: 6.6501

>NTDB_id=604196 NKZ80_RS01255 WP_024417441.1 226590..228923(+) (mutS/mutS2) [Streptococcus suis strain STC85]
MNNKIIETLEFHKVRQKIEPYLLTEQGFEELRQLEPMVEVHRIQQAFDELTDIAQIFVENPYFSLAATSDIGPAMRRLEL
DTDLNIAELLAVKKVLEVSKSLLDFYGNLENVSLSQLDKLFEKIELFPHLQGSLQSINDAGFVEDFASEKLARIRRKIRE
AEDQVRQVMQDILKTKGDMLSDSILASRNGRNVLPVKNTYRNKIAGVVHDISASGSTVYIEPRAVVTLNEEISHLRAEER
HELNRILQELSDMLRPHSGVIRNNAWLIGHIDFVRAKHLFAREHQAVVPKLSEKQDIALLNVRHPLIAKPVPNDLYFGSQ
LTAIVITGPNTGGKTIMLKTLGLTHLMAQSGLPILADKGSRVAIFKEIFADIGDEQSIEQSLSTFSSHMTHTVQILAEAD
QDSLILFDELGAGTDPQEGASLAMAILDDLRLRGIKTMATTHYPELKAYGIETSGIENASMEFDSNSLRPTYKFMQGVPG
RSNAFEIARRLGLSDIIIQSAQSWTDTDSDVNRIIEKLESQTVESRQRLDKIRDVEQENYKMNRALRKLYDELNRERENE
LNKARLEAKEIVDMALAESEDILKNLHAAASLKPHQIIEAKAELKKLAPEVVDLSKNKVLKKAKIQREAKVGDDIIVTAY
GQRGTLTNQLKDGRWEAQVGLIKMTLAKDEFELVKAEKAEQPKKRQVHTVKRANVRGPKARLDLRGKRYEEAMMELDEFI
DQALLNNLAQVDIVHGIGTGVIREGVTKYLRRNKQVKEFGYAPQNAGGSGCTIVTFK

Nucleotide


Download         Length: 2334 bp        

>NTDB_id=604196 NKZ80_RS01255 WP_024417441.1 226590..228923(+) (mutS/mutS2) [Streptococcus suis strain STC85]
ATGAATAATAAAATTATTGAAACCCTTGAATTTCACAAGGTAAGACAAAAAATTGAGCCCTATCTCTTGACGGAACAGGG
CTTTGAAGAATTACGACAGTTGGAGCCCATGGTGGAAGTCCACCGTATCCAACAGGCCTTCGACGAGTTGACAGACATAG
CGCAGATTTTTGTGGAAAATCCCTATTTCAGTCTGGCTGCTACTAGTGACATCGGTCCAGCCATGCGTCGTTTGGAATTG
GATACAGACCTCAATATCGCTGAATTATTAGCTGTTAAAAAGGTCTTGGAAGTTTCTAAATCTCTCTTGGATTTTTATGG
AAATCTGGAAAATGTCAGTCTTAGCCAGTTGGATAAACTCTTTGAGAAGATTGAGCTTTTTCCACATTTACAGGGCTCCC
TCCAGTCCATCAATGATGCTGGTTTTGTAGAGGATTTTGCCTCAGAAAAGCTGGCTCGTATTAGAAGAAAAATCCGTGAA
GCTGAAGATCAAGTTCGTCAGGTCATGCAGGATATTTTGAAGACCAAGGGCGACATGCTGTCCGATAGCATTTTGGCAAG
CCGTAATGGACGCAATGTCCTTCCTGTTAAAAATACCTATCGCAATAAGATTGCAGGGGTTGTCCATGATATTTCTGCTT
CGGGTTCGACCGTTTATATTGAGCCGCGGGCAGTGGTGACCTTGAACGAAGAAATCAGTCACCTACGTGCAGAAGAACGC
CATGAGCTCAACCGTATCTTGCAGGAATTGTCGGATATGCTCCGTCCGCATAGTGGCGTGATTCGTAACAATGCCTGGCT
TATCGGGCATATTGATTTCGTCCGTGCTAAGCATCTCTTTGCGCGTGAACATCAAGCAGTTGTACCCAAACTATCTGAGA
AGCAGGATATTGCTCTTCTCAACGTTCGACATCCGCTCATTGCTAAGCCTGTACCAAATGACCTTTATTTCGGTAGTCAG
TTGACGGCTATCGTGATAACAGGTCCCAACACAGGTGGTAAGACCATCATGCTTAAGACCTTGGGATTGACCCATCTGAT
GGCCCAGTCTGGTTTGCCTATCTTGGCTGATAAGGGCAGTCGAGTAGCTATCTTCAAAGAAATTTTTGCGGATATTGGGG
ACGAACAGTCTATTGAGCAGAGTTTATCAACCTTCTCCAGTCACATGACCCACACGGTGCAGATTTTAGCGGAGGCTGAT
CAAGATTCTCTCATTCTATTTGACGAGTTGGGAGCTGGGACAGATCCGCAGGAGGGGGCATCCTTGGCTATGGCTATTTT
GGATGACCTTCGTCTGCGGGGGATCAAGACCATGGCGACCACCCACTACCCTGAGCTTAAGGCCTACGGGATAGAAACCT
CTGGTATTGAAAATGCCAGCATGGAGTTTGATAGCAATAGCCTGCGTCCGACCTATAAGTTTATGCAGGGTGTTCCTGGT
CGCTCCAATGCCTTTGAAATTGCCCGCCGTCTTGGTCTATCTGATATTATTATCCAGTCAGCCCAATCTTGGACGGATAC
AGATAGCGATGTGAACCGCATTATCGAGAAATTGGAAAGTCAGACGGTTGAAAGTCGTCAACGTCTGGATAAGATTCGTG
ATGTGGAGCAAGAAAATTACAAGATGAACCGAGCCCTCCGCAAGCTCTATGACGAGCTCAATCGTGAGCGGGAAAATGAG
CTCAACAAGGCACGCTTGGAAGCCAAGGAAATTGTAGATATGGCATTGGCAGAAAGCGAGGATATTCTCAAAAATCTCCA
TGCTGCAGCTAGTCTTAAGCCCCATCAGATTATCGAAGCCAAAGCAGAGCTGAAAAAGTTGGCGCCTGAAGTGGTGGATC
TGTCTAAAAACAAGGTTCTGAAGAAAGCTAAAATTCAGAGGGAAGCCAAGGTGGGCGATGACATTATCGTTACAGCTTAT
GGACAACGCGGGACCTTGACCAATCAGCTCAAGGACGGGCGTTGGGAAGCTCAGGTTGGCTTGATTAAGATGACCTTGGC
CAAGGATGAGTTTGAGTTAGTCAAGGCGGAGAAGGCAGAGCAGCCTAAGAAACGCCAGGTTCACACAGTCAAACGTGCCA
ATGTACGAGGTCCAAAAGCCCGCTTAGATCTCCGTGGCAAACGCTACGAAGAGGCTATGATGGAGCTGGATGAATTTATC
GATCAGGCCCTTCTCAATAACCTAGCCCAAGTCGATATTGTCCACGGTATAGGTACAGGTGTCATCCGAGAAGGGGTGAC
CAAGTACCTACGCCGAAACAAGCAGGTCAAGGAGTTCGGCTATGCCCCACAAAATGCAGGTGGATCAGGCTGTACTATTG
TGACGTTTAAATAA

Domains

Predicted by InterProScan.

MutS2 and Smr-associated SH3 domain (MSSS)

(631-670)

Smr domain (Smr)

(702-777)

MutS domain V (MutS_V)

(324-504)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.646

100

0.404