Detailed information NTG0603508

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: K7887_RS15365
• Genome accession: NZ_CP082918
• Coordinates: 2974664..2977066 (-)
• Length: 800 a.a.
• NCBI ID: WP_223490333.1
• Uniprot ID: -
• Organism: Sutcliffiella horikoshii strain BAT
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2969664..2982066

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K7887_RS15335 (K7887_15305)	-	2969993..2971351 (-)	1359	WP_223493671.1	NAD(P)-dependent oxidoreductase	-
K7887_RS15340 (K7887_15310)	-	2971483..2972373 (-)	891	WP_223490328.1	nitrilase-related carbon-nitrogen hydrolase	-
K7887_RS15345 (K7887_15315)	-	2972904..2973059 (-)	156	WP_010196047.1	YrzQ family protein	-
K7887_RS15350 (K7887_15320)	-	2973082..2973276 (-)	195	WP_047969446.1	hypothetical protein	-
K7887_RS15355 (K7887_15325)	-	2973292..2973765 (-)	474	WP_223490330.1	PRC-barrel domain-containing protein	-
K7887_RS15360 (K7887_15330)	-	2973952..2974578 (+)	627	WP_223490331.1	hypothetical protein	-
K7887_RS15365 (K7887_15335)	recD2	2974664..2977066 (-)	2403	WP_223490333.1	ATP-dependent RecD-like DNA helicase	Machinery gene
K7887_RS15370 (K7887_15340)	-	2977085..2977741 (-)	657	WP_223490335.1	tetratricopeptide repeat protein	-
K7887_RS15375 (K7887_15345)	mnmA	2977829..2978944 (-)	1116	WP_223490337.1	tRNA 2-thiouridine(34) synthase MnmA	-
K7887_RS15380 (K7887_15350)	-	2979183..2980334 (-)	1152	WP_223490339.1	cysteine desulfurase family protein	-
K7887_RS15385 (K7887_15355)	cymR	2980382..2980798 (-)	417	WP_088018959.1	cysteine metabolism transcriptional regulator CymR	-
K7887_RS15390 (K7887_15360)	-	2980831..2981505 (-)	675	WP_223490341.1	YitT family protein	-

Sequence

Protein

• Length: 800 a.a.
• Molecular weight: 89872.11 Da
• Isoelectric Point: 4.7938

>NTDB_id=603508 K7887_RS15365 WP_223490333.1 2974664..2977066(-) (recD2) [Sutcliffiella horikoshii strain BAT]
MKDQKQQSSLDLFEENEKFIKGSHLVTIFHNESNMYSVVRIRVTETNVAYDEKEAVVTGYFPRIHEDETYIFFGQMKEHP
RFGLQFHVEHFRKDIPQTRHGIVQYLSSDLFSGIGRKTAEKIADALGENAISKILENPSVLDSIPKLAGDKAKSLYDTLM
EHQGLEQVMIALSQFGFGPQLSMKIYQAYKDQTIETLQKNPYELVETVEGIGFARADELGNHFGISGNHPDRIRAGCLYM
LEQHSMQEGHCYVVEDQLTEAVVRLLNEKQHGLVAESDISREIMQLTEEGKVKAEEGKVYLPSLYFSEQGVVTNIKRVLE
QTQYADQFPESEFLLALGELEDRLKVQYAPSQKEAIQQALMTPMLLLTGGPGTGKTTVIKGIVELYADLHGCSLEPNDYS
KDDPFPIMLVAPTGRAAKRMSEATGLPSLTIHRLLGWNGSEGFQHDEENPISGKLLIVDEVSMVDIWLANQLFKSLPEDI
QVVLVGDEDQLPSVGPGQVLKDLLASKVIPTVQLTDIYRQADGSSIIELAHDMKDGTVPADISSGQKDRSFIKCGQSQIL
DVVKKVCANAQSKGYTARDIQVLAPMYRGTAGIDKLNEMLQELFNPKSDQRRELSFGNVVYRTGDKVLQLVNQPESHVFN
GDIGEVVSIFYAKENTEKQDMVIVSFDGNEVTYTKQDLGQITHAYCCSIHKSQGSEFPIVVLPVVKSYYRMLRRNLLYTA
VTRAKRFLILCGEEEALKLGVQRADEMARQTSLKERLQTKESGTLPDEEVIDPVLQEVPFWKDANIGMENVSPYDFMDEE

Nucleotide

• Length: 2403 bp

>NTDB_id=603508 K7887_RS15365 WP_223490333.1 2974664..2977066(-) (recD2) [Sutcliffiella horikoshii strain BAT]
ATGAAGGACCAAAAGCAGCAATCCTCACTCGATTTGTTCGAGGAAAATGAAAAGTTTATTAAAGGATCGCATCTTGTCAC
CATCTTCCATAATGAATCCAATATGTATTCAGTGGTGCGGATCCGAGTGACGGAGACGAATGTTGCGTATGATGAAAAAG
AAGCGGTCGTTACTGGTTATTTCCCTCGCATTCATGAAGACGAGACATACATATTTTTTGGACAGATGAAGGAACATCCT
CGTTTTGGGCTTCAATTTCATGTTGAGCACTTTCGTAAGGACATTCCACAAACACGACACGGTATTGTCCAATATCTATC
AAGCGATTTGTTTTCAGGAATCGGAAGAAAAACGGCTGAAAAAATTGCAGATGCACTTGGTGAAAATGCCATTTCCAAAA
TACTTGAGAATCCTTCTGTGTTGGATTCCATCCCAAAGCTTGCCGGTGATAAAGCGAAATCGTTATATGACACGTTGATG
GAACATCAAGGGTTGGAACAAGTAATGATTGCCTTGTCGCAGTTTGGTTTTGGTCCGCAATTGTCCATGAAAATTTATCA
GGCCTATAAAGATCAAACGATTGAAACGCTCCAAAAGAACCCGTACGAACTTGTGGAAACAGTAGAGGGTATTGGCTTTG
CCAGAGCAGATGAACTTGGAAATCACTTCGGGATATCCGGAAATCATCCAGACCGCATTAGGGCAGGCTGCCTGTATATG
CTAGAACAGCATTCCATGCAGGAGGGTCACTGTTACGTGGTTGAAGACCAGCTTACTGAAGCGGTCGTCAGACTATTAAA
CGAAAAGCAGCATGGCCTTGTTGCAGAGTCTGACATTTCTCGGGAAATTATGCAATTGACTGAAGAAGGAAAGGTTAAAG
CGGAAGAAGGGAAAGTCTATTTACCTAGTCTCTATTTTTCAGAGCAAGGTGTGGTAACCAATATCAAAAGGGTGCTGGAG
CAAACTCAATATGCCGACCAGTTTCCTGAGTCAGAATTCCTTCTTGCCTTAGGTGAATTAGAAGACAGATTGAAGGTTCA
ATATGCTCCTTCGCAAAAAGAAGCCATACAGCAAGCATTAATGACTCCCATGCTTCTTTTGACAGGTGGGCCAGGGACAG
GTAAAACGACCGTTATTAAAGGAATCGTTGAACTGTACGCAGACCTTCATGGTTGTTCATTGGAACCTAATGATTACAGC
AAAGATGATCCTTTTCCGATTATGCTTGTCGCCCCAACAGGCCGTGCTGCCAAACGCATGAGCGAGGCGACTGGCCTTCC
TTCTCTTACTATTCATAGGCTACTCGGTTGGAATGGTTCGGAAGGGTTTCAACATGACGAAGAAAACCCCATCTCAGGTA
AGCTTTTGATTGTGGATGAAGTGTCAATGGTGGATATTTGGCTTGCCAATCAACTGTTTAAATCTCTTCCTGAGGATATA
CAAGTCGTATTAGTGGGGGATGAAGATCAGCTTCCTTCCGTTGGTCCAGGCCAAGTGTTAAAGGACTTACTCGCATCCAA
AGTCATTCCTACCGTTCAATTGACTGATATCTACAGACAGGCAGATGGTTCATCCATCATTGAGTTGGCCCACGATATGA
AGGATGGTACAGTGCCAGCAGACATATCATCCGGACAGAAGGACCGTTCTTTTATCAAATGCGGACAGTCGCAAATATTG
GATGTAGTAAAAAAAGTATGTGCCAACGCGCAAAGCAAGGGCTATACTGCCCGCGATATCCAGGTGCTTGCACCAATGTA
CAGAGGGACAGCGGGAATAGATAAACTTAATGAAATGCTTCAGGAGCTTTTCAATCCTAAAAGTGACCAGCGGCGTGAAT
TAAGCTTCGGCAATGTTGTATACAGGACCGGAGATAAAGTGCTGCAGCTTGTCAATCAACCGGAAAGTCATGTGTTCAAC
GGTGACATAGGTGAAGTGGTTTCCATCTTTTATGCGAAAGAAAATACCGAAAAACAGGACATGGTCATCGTATCCTTTGA
TGGCAATGAAGTTACTTATACGAAGCAAGATCTCGGGCAGATAACCCATGCATATTGTTGTTCTATACATAAGTCTCAAG
GAAGTGAGTTTCCGATTGTGGTATTGCCTGTAGTAAAGAGCTATTACAGGATGTTACGACGAAATCTACTTTACACAGCT
GTTACAAGAGCGAAGAGATTTTTAATTCTTTGCGGCGAAGAAGAAGCATTAAAGCTTGGCGTGCAACGCGCGGATGAGAT
GGCAAGGCAAACATCCTTGAAAGAAAGGCTTCAAACAAAAGAGTCCGGAACTTTACCAGACGAGGAAGTCATTGATCCTG
TACTTCAAGAAGTTCCTTTTTGGAAAGACGCTAACATCGGCATGGAGAATGTCAGTCCATATGATTTTATGGATGAAGAA
TAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (596-666)

• Helix-hairpin-helix containing domain (HHH_RecD2) (161-252)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (683-731)

• AAA domain (AAA_30) (348-556)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	63.784	99.75	0.636