Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   HK74_RS02415 Genome accession   NC_021834
Coordinates   460977..461492 (-) Length   171 a.a.
NCBI ID   WP_002799196.1    Uniprot ID   Q0P8R6
Organism   Campylobacter jejuni 32488     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 455977..466492
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HK74_RS02400 (M635_02390) - 456089..457906 (-) 1818 WP_020836873.1 motility associated factor glycosyltransferase family protein -
  HK74_RS02405 (M635_02395) - 457903..459726 (-) 1824 WP_020836874.1 motility associated factor glycosyltransferase family protein -
  HK74_RS02410 (M635_02400) - 459736..460977 (-) 1242 WP_020836875.1 DUF2920 family protein -
  HK74_RS02415 (M635_02405) ctsG 460977..461492 (-) 516 WP_002799196.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  HK74_RS02420 (M635_02410) tsaD 461493..462500 (-) 1008 WP_020836876.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  HK74_RS02425 (M635_02420) - 462497..463891 (-) 1395 WP_041176896.1 M99 family carboxypeptidase catalytic domain-containing protein -
  HK74_RS02430 (M635_02425) dxr 463893..464963 (-) 1071 WP_002860792.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  HK74_RS02435 (M635_02430) cdsA 464960..465685 (-) 726 WP_002875974.1 phosphatidate cytidylyltransferase -
  HK74_RS02440 (M635_02435) - 465694..466032 (-) 339 WP_002852397.1 hypothetical protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18678.56 Da        Isoelectric Point: 6.4682

>NTDB_id=60333 HK74_RS02415 WP_002799196.1 460977..461492(-) (ctsG) [Campylobacter jejuni 32488]
MKKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLSN
FNGIKEVNFRVGDDKECLKLVFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYLLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=60333 HK74_RS02415 WP_002799196.1 460977..461492(-) (ctsG) [Campylobacter jejuni 32488]
ATGAAAAAAGCTTTTACTATATTAGAACTTGTTTTTGTGATCGTTATTTTGGGAATTTTAGCCGCTATTGCTTTGCCAAA
AATGAGTTCAAGTAAGGATGAAGCTGAAGTTAGCAAGTCTTTAAACAACCTTAAAACTTTGATCAATGATATAAGCATTT
ATACTTTAAAAAATGATCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGCGGGGTTGAAAATGTTGATCTTAGTAAT
TTTAACGGTATAAAAGAAGTAAATTTTCGCGTAGGCGATGATAAAGAATGCTTAAAACTTGTTTTTATAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCTATCATCAACGCAGCTAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGTAATAAAGCTTGTGTGATTTTAAGTAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q0P8R6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

94.152

100

0.942

Multiple sequence alignment