Detailed information NTG0060285

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K6J71_RS02935
• Genome accession: NZ_AP018783
• Coordinates: 584699..585697 (-)
• Length: 332 a.a.
• NCBI ID: WP_005649443.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain CHBN-V-3 isolate 15H03
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 579699..590697

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6J71_RS02910 (CHBNV3_05500)	tehA	580674..581618 (+)	945	WP_005649454.1	dicarboxylate transporter/tellurite-resistance protein TehA	-
K6J71_RS02915 (CHBNV3_05510)	tsaA	581671..582390 (-)	720	WP_005649451.1	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	-
K6J71_RS02920 (CHBNV3_05520)	menA	582452..583363 (+)	912	WP_005649448.1	1,4-dihydroxy-2-naphthoate octaprenyltransferase	-
K6J71_RS02925 (CHBNV3_05530)	rraA	583415..583903 (+)	489	WP_005649446.1	ribonuclease E activity regulator RraA	-
K6J71_RS02930 (CHBNV3_05540)	-	584043..584594 (-)	552	WP_005649445.1	TIGR00645 family protein	-
K6J71_RS02935 (CHBNV3_05550)	cytR	584699..585697 (-)	999	WP_005649443.1	substrate-binding domain-containing protein	Regulator
K6J71_RS02940 (CHBNV3_05560)	rbsK	585725..586645 (-)	921	WP_005666427.1	ribokinase	-
K6J71_RS02945 (CHBNV3_05570)	rbsB	586742..587620 (-)	879	WP_005666429.1	ribose ABC transporter substrate-binding protein RbsB	-
K6J71_RS02950 (CHBNV3_05580)	rbsC	587640..588608 (-)	969	WP_005649437.1	ribose ABC transporter permease	-
K6J71_RS02955 (CHBNV3_05590)	rbsA	588624..590105 (-)	1482	WP_005649436.1	ribose ABC transporter ATP-binding protein RbsA	-
K6J71_RS02960 (CHBNV3_05600)	rbsD	590119..590538 (-)	420	WP_005666439.1	D-ribose pyranase	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 36748.52 Da
• Isoelectric Point: 8.4556

>NTDB_id=60285 K6J71_RS02935 WP_005649443.1 584699..585697(-) (cytR) [Haemophilus influenzae strain CHBN-V-3 isolate 15H03]
MATMKDIARLAQVSTSTVSHVINGSRFVSDEIREKVMRIVAELNYTPSAVARSLKVRETKTIGLLVTATNNPFFAEVMAG
VEQYCQKNQYNLIIATTGGDAKRLQQNLQTLMHKQVDGLLLMCGDSRFQADIELAISLPLVVMDWWFTELNADKILENSA
LGGYLATKALIDAGHRKIGIITGNLKKSVAQNRLQGYKNALSEAKIALNPHWIVESHFDFEGGVLGIQSLLTQSSRPTAV
FCCSDTIAVGAYQAIQQQGLRIPQDLSIMGYDDIELARYLSPPLSTICQPKAKLGKLAVETLLQRIKNPNENYRTLVLEP
TCVLRESIYSFK

Nucleotide

• Length: 999 bp

>NTDB_id=60285 K6J71_RS02935 WP_005649443.1 584699..585697(-) (cytR) [Haemophilus influenzae strain CHBN-V-3 isolate 15H03]
ATGGCGACAATGAAAGATATTGCACGACTGGCGCAAGTTTCGACTTCCACAGTTTCACATGTCATTAATGGATCGCGTTT
TGTCAGCGATGAAATTCGTGAGAAAGTGATGCGTATTGTCGCTGAACTGAATTACACCCCCTCAGCTGTTGCACGAAGCC
TTAAGGTGCGCGAAACCAAAACTATCGGACTACTTGTCACCGCAACAAATAATCCCTTCTTTGCGGAAGTGATGGCTGGC
GTGGAGCAATACTGTCAGAAAAATCAATATAATCTTATTATTGCTACAACGGGTGGAGATGCCAAACGCCTACAACAAAA
TCTGCAAACTCTAATGCACAAACAAGTGGATGGTTTGCTTTTGATGTGTGGTGATAGCCGTTTTCAGGCTGATATAGAGT
TAGCTATTTCGCTGCCACTGGTTGTGATGGACTGGTGGTTTACTGAGTTAAATGCAGATAAAATACTCGAAAATTCAGCA
CTTGGTGGCTATTTGGCGACAAAAGCATTAATTGATGCAGGACATCGTAAAATTGGCATTATTACGGGAAATCTCAAAAA
ATCTGTCGCACAAAATCGTTTGCAAGGTTATAAAAATGCGCTCTCGGAAGCAAAAATTGCGTTAAATCCTCATTGGATTG
TCGAAAGTCATTTTGACTTTGAAGGCGGTGTACTTGGCATACAATCTTTACTTACTCAATCTTCACGTCCAACAGCAGTT
TTTTGTTGTAGTGACACCATTGCTGTCGGTGCATACCAAGCTATTCAGCAACAAGGCTTACGTATTCCGCAAGATCTTTC
AATTATGGGTTATGATGACATTGAATTGGCTCGTTATCTCTCGCCTCCTCTCTCCACCATTTGCCAACCGAAAGCTAAAC
TTGGCAAACTCGCTGTTGAAACACTATTGCAACGAATTAAAAATCCTAATGAAAATTACCGCACTTTGGTGTTAGAACCG
ACTTGTGTGTTAAGAGAGTCTATTTACAGTTTCAAATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-327)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	36.585	98.795	0.361