Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   K8B76_RS10875 Genome accession   NZ_CP082820
Coordinates   1750345..1751166 (-) Length   273 a.a.
NCBI ID   WP_000601678.1    Uniprot ID   A0A6I3U1Q8
Organism   Streptococcus pneumoniae strain SCAID PHRX1-2021     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1745345..1756166
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K8B76_RS08700 (K8B76_08700) - 1745837..1746154 (-) 318 WP_000615776.1 thioredoxin family protein -
  K8B76_RS08705 (K8B76_08705) - 1746151..1746450 (-) 300 WP_001818001.1 DUF4651 domain-containing protein -
  K8B76_RS10865 - 1746544..1746675 (+) 132 WP_001811306.1 hypothetical protein -
  K8B76_RS08710 (K8B76_08710) - 1746700..1746897 (-) 198 Protein_1724 N-acetylmuramoyl-L-alanine amidase family protein -
  K8B76_RS08715 (K8B76_08715) - 1747139..1747813 (-) 675 WP_000725750.1 membrane protein -
  K8B76_RS08720 (K8B76_08720) - 1747819..1748265 (-) 447 WP_000776589.1 LytTR family DNA-binding domain-containing protein -
  K8B76_RS08725 (K8B76_08725) - 1748379..1748882 (-) 504 WP_000800942.1 phosphatase PAP2 family protein -
  K8B76_RS08730 (K8B76_08730) - 1748879..1749241 (-) 363 WP_000078804.1 DUF2200 domain-containing protein -
  K8B76_RS10870 - 1749307..1750152 (-) 846 Protein_1729 ATP-binding cassette domain-containing protein -
  K8B76_RS10875 rcrP 1750345..1751166 (-) 822 WP_000601678.1 ABC transporter permease Regulator
  K8B76_RS08740 (K8B76_08740) - 1751183..1751654 (-) 472 Protein_1731 MarR family winged helix-turn-helix transcriptional regulator -
  K8B76_RS08745 (K8B76_08745) - 1751778..1752494 (-) 717 WP_000532876.1 YebC/PmpR family DNA-binding transcriptional regulator -
  K8B76_RS08750 (K8B76_08750) ply 1753375..1754790 (-) 1416 WP_001284359.1 cholesterol-dependent cytolysin pneumolysin -
  K8B76_RS08755 (K8B76_08755) - 1754801..1755211 (-) 411 WP_000595757.1 hypothetical protein -
  K8B76_RS08760 (K8B76_08760) - 1755204..1755812 (-) 609 Protein_1735 hypothetical protein -

Sequence

Protein


Download         Length: 273 a.a.        Molecular weight: 30614.21 Da        Isoelectric Point: 5.9310

>NTDB_id=602589 K8B76_RS10875 WP_000601678.1 1750345..1751166(-) (rcrP) [Streptococcus pneumoniae strain SCAID PHRX1-2021]
MILLAILFTCFSVYLELEVPTYISKITDLLGSQETNLDELWQPASMMMGMSFLAFLSVVAVGFFASRVAASYTSRLRSDI
FNRVLDYSQTEIKKFSIPSLLTRTTNDITQVQMLITMGLQVVTRGPIMAIWAIGKILGHSEYWLWAVLVVVIVNVLMTTV
LMTLAFPKQSLIQGLTDKLNSITRESLTGIRVVRAYNAEDYQNEKFAAVNDELTRLNLFVNRLMAILNPIMMGISSGLSV
AIYWIGAYVINDAAPIARLPLFSDMIIFMSYAM

Nucleotide


Download         Length: 822 bp        

>NTDB_id=602589 K8B76_RS10875 WP_000601678.1 1750345..1751166(-) (rcrP) [Streptococcus pneumoniae strain SCAID PHRX1-2021]
ATGATTTTACTAGCCATTCTCTTTACTTGCTTTTCGGTCTATCTAGAGTTGGAAGTGCCGACCTATATCTCGAAAATTAC
GGATTTGCTAGGTAGTCAAGAAACTAATTTAGATGAGTTGTGGCAGCCGGCAAGCATGATGATGGGAATGTCCTTTCTTG
CCTTCTTGTCCGTAGTTGCAGTTGGATTTTTTGCATCCCGAGTGGCGGCTTCTTATACTAGTAGGCTGAGAAGTGATATT
TTTAACCGAGTTTTGGATTACTCGCAGACAGAGATTAAGAAATTTTCAATTCCTAGCCTCTTGACGCGTACTACCAATGA
CATTACTCAAGTTCAAATGTTGATTACTATGGGCTTGCAAGTGGTAACGCGTGGTCCAATTATGGCTATCTGGGCTATTG
GGAAGATTTTAGGTCATTCAGAATACTGGCTCTGGGCCGTACTTGTGGTAGTGATTGTCAACGTCCTGATGACGACCGTT
TTGATGACGCTAGCCTTTCCAAAACAGTCCTTGATTCAGGGGTTGACAGATAAACTGAACAGTATCACTCGTGAGAGTTT
AACAGGTATTCGTGTCGTTCGTGCCTACAATGCAGAGGATTATCAAAATGAAAAATTTGCAGCAGTAAATGATGAATTGA
CCCGTTTGAATTTGTTTGTCAACCGTCTTATGGCTATTTTGAATCCTATCATGATGGGGATTTCAAGTGGTTTGAGTGTA
GCGATTTACTGGATTGGGGCCTATGTGATTAACGACGCTGCTCCGATAGCGCGTCTGCCTCTCTTTAGTGACATGATTAT
TTTCATGTCTTATGCCATGTAG

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(3-271)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6I3U1Q8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

57.193

100

0.597