Detailed information NTG0060222

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K6J59_RS02700
• Genome accession: NZ_AP018782
• Coordinates: 551133..552131 (-)
• Length: 332 a.a.
• NCBI ID: WP_005649443.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain CHBN-V-2 isolate 13H37
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 546133..557131

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6J59_RS02675 (CHBNV2_04950)	tehA	547108..548052 (+)	945	WP_005649454.1	dicarboxylate transporter/tellurite-resistance protein TehA	-
K6J59_RS02680 (CHBNV2_04960)	tsaA	548105..548824 (-)	720	WP_005649451.1	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	-
K6J59_RS02685 (CHBNV2_04970)	menA	548886..549797 (+)	912	WP_005649448.1	1,4-dihydroxy-2-naphthoate octaprenyltransferase	-
K6J59_RS02690 (CHBNV2_04980)	rraA	549849..550337 (+)	489	WP_005649446.1	ribonuclease E activity regulator RraA	-
K6J59_RS02695 (CHBNV2_04990)	-	550477..551028 (-)	552	WP_005649445.1	TIGR00645 family protein	-
K6J59_RS02700 (CHBNV2_05000)	cytR	551133..552131 (-)	999	WP_005649443.1	substrate-binding domain-containing protein	Regulator
K6J59_RS02705 (CHBNV2_05010)	rbsK	552159..553079 (-)	921	WP_005666427.1	ribokinase	-
K6J59_RS02710 (CHBNV2_05020)	rbsB	553176..554054 (-)	879	WP_005666429.1	ribose ABC transporter substrate-binding protein RbsB	-
K6J59_RS02715 (CHBNV2_05030)	rbsC	554074..555042 (-)	969	WP_005649437.1	ribose ABC transporter permease	-
K6J59_RS02720 (CHBNV2_05040)	rbsA	555058..556539 (-)	1482	WP_005649436.1	ribose ABC transporter ATP-binding protein RbsA	-
K6J59_RS02725 (CHBNV2_05050)	rbsD	556553..556972 (-)	420	WP_005666439.1	D-ribose pyranase	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 36748.52 Da
• Isoelectric Point: 8.4556

>NTDB_id=60222 K6J59_RS02700 WP_005649443.1 551133..552131(-) (cytR) [Haemophilus influenzae strain CHBN-V-2 isolate 13H37]
MATMKDIARLAQVSTSTVSHVINGSRFVSDEIREKVMRIVAELNYTPSAVARSLKVRETKTIGLLVTATNNPFFAEVMAG
VEQYCQKNQYNLIIATTGGDAKRLQQNLQTLMHKQVDGLLLMCGDSRFQADIELAISLPLVVMDWWFTELNADKILENSA
LGGYLATKALIDAGHRKIGIITGNLKKSVAQNRLQGYKNALSEAKIALNPHWIVESHFDFEGGVLGIQSLLTQSSRPTAV
FCCSDTIAVGAYQAIQQQGLRIPQDLSIMGYDDIELARYLSPPLSTICQPKAKLGKLAVETLLQRIKNPNENYRTLVLEP
TCVLRESIYSFK

Nucleotide

• Length: 999 bp

>NTDB_id=60222 K6J59_RS02700 WP_005649443.1 551133..552131(-) (cytR) [Haemophilus influenzae strain CHBN-V-2 isolate 13H37]
ATGGCGACAATGAAAGATATTGCACGACTGGCGCAAGTTTCGACTTCCACAGTTTCACATGTCATTAATGGATCGCGTTT
TGTCAGCGATGAAATTCGTGAGAAAGTGATGCGTATTGTCGCTGAACTGAATTACACCCCCTCAGCTGTTGCACGAAGCC
TTAAGGTGCGCGAAACCAAAACTATCGGACTACTTGTCACCGCAACAAATAATCCCTTCTTTGCGGAAGTGATGGCTGGC
GTGGAGCAATACTGTCAGAAAAATCAATATAATCTTATTATTGCTACAACGGGTGGAGATGCCAAACGCCTACAACAAAA
TCTGCAAACTCTAATGCACAAACAAGTGGATGGTTTGCTTTTGATGTGTGGTGATAGCCGTTTTCAGGCTGATATAGAGT
TAGCTATTTCGCTGCCACTGGTTGTGATGGACTGGTGGTTTACTGAGTTAAATGCAGATAAAATACTCGAAAATTCAGCA
CTTGGTGGCTATTTGGCGACAAAAGCATTAATTGATGCAGGACATCGTAAAATTGGCATTATTACGGGAAATCTCAAAAA
ATCTGTCGCACAAAATCGTTTGCAAGGTTATAAAAATGCGCTCTCGGAAGCAAAAATTGCGTTAAATCCTCATTGGATTG
TCGAAAGTCATTTTGACTTTGAAGGCGGTGTACTTGGCATACAATCTTTACTTACTCAATCTTCACGTCCAACAGCAGTT
TTTTGTTGTAGTGACACCATTGCTGTCGGTGCATACCAAGCTATTCAGCAACAAGGCTTACGTATTCCGCAAGATCTTTC
AATTATGGGTTATGATGACATTGAATTGGCTCGTTATCTCTCGCCTCCTCTCTCCACCATTTGCCAACCGAAAGCTAAAC
TTGGCAAACTCGCTGTTGAAACACTATTGCAACGAATTAAAAATCCTAATGAAAATTACCGCACTTTGGTGTTAGAACCG
ACTTGTGTGTTAAGAGAGTCTATTTACAGTTTCAAATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-327)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	36.585	98.795	0.361