Detailed information NTG0060159

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: CHBNTHi_RS03010
• Genome accession: NZ_AP018781
• Coordinates: 596226..597224 (-)
• Length: 332 a.a.
• NCBI ID: WP_005649443.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain CHBN-V-1 isolate 13H43
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 591226..602224

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CHBNTHi_RS02985 (CHBNV1_05610)	tehA	592201..593145 (+)	945	WP_005649454.1	dicarboxylate transporter/tellurite-resistance protein TehA	-
CHBNTHi_RS02990 (CHBNV1_05620)	tsaA	593198..593917 (-)	720	WP_005649451.1	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	-
CHBNTHi_RS02995 (CHBNV1_05630)	menA	593979..594890 (+)	912	WP_005649448.1	1,4-dihydroxy-2-naphthoate octaprenyltransferase	-
CHBNTHi_RS03000 (CHBNV1_05640)	rraA	594942..595430 (+)	489	WP_005649446.1	ribonuclease E activity regulator RraA	-
CHBNTHi_RS03005 (CHBNV1_05650)	-	595570..596121 (-)	552	WP_005649445.1	TIGR00645 family protein	-
CHBNTHi_RS03010 (CHBNV1_05660)	cytR	596226..597224 (-)	999	WP_005649443.1	substrate-binding domain-containing protein	Regulator
CHBNTHi_RS03015 (CHBNV1_05670)	rbsK	597252..598172 (-)	921	WP_005666427.1	ribokinase	-
CHBNTHi_RS03020 (CHBNV1_05680)	rbsB	598269..599147 (-)	879	WP_005666429.1	ribose ABC transporter substrate-binding protein RbsB	-
CHBNTHi_RS03025 (CHBNV1_05690)	rbsC	599167..600135 (-)	969	WP_005649437.1	ribose ABC transporter permease	-
CHBNTHi_RS03030 (CHBNV1_05700)	rbsA	600151..601632 (-)	1482	WP_005649436.1	ribose ABC transporter ATP-binding protein RbsA	-
CHBNTHi_RS03035 (CHBNV1_05710)	rbsD	601646..602065 (-)	420	WP_005666439.1	D-ribose pyranase	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 36748.52 Da
• Isoelectric Point: 8.4556

>NTDB_id=60159 CHBNTHi_RS03010 WP_005649443.1 596226..597224(-) (cytR) [Haemophilus influenzae strain CHBN-V-1 isolate 13H43]
MATMKDIARLAQVSTSTVSHVINGSRFVSDEIREKVMRIVAELNYTPSAVARSLKVRETKTIGLLVTATNNPFFAEVMAG
VEQYCQKNQYNLIIATTGGDAKRLQQNLQTLMHKQVDGLLLMCGDSRFQADIELAISLPLVVMDWWFTELNADKILENSA
LGGYLATKALIDAGHRKIGIITGNLKKSVAQNRLQGYKNALSEAKIALNPHWIVESHFDFEGGVLGIQSLLTQSSRPTAV
FCCSDTIAVGAYQAIQQQGLRIPQDLSIMGYDDIELARYLSPPLSTICQPKAKLGKLAVETLLQRIKNPNENYRTLVLEP
TCVLRESIYSFK

Nucleotide

• Length: 999 bp

>NTDB_id=60159 CHBNTHi_RS03010 WP_005649443.1 596226..597224(-) (cytR) [Haemophilus influenzae strain CHBN-V-1 isolate 13H43]
ATGGCGACAATGAAAGATATTGCACGACTGGCGCAAGTTTCGACTTCCACAGTTTCACATGTCATTAATGGATCGCGTTT
TGTCAGCGATGAAATTCGTGAGAAAGTGATGCGTATTGTCGCTGAACTGAATTACACCCCCTCAGCTGTTGCACGAAGCC
TTAAGGTGCGCGAAACCAAAACTATCGGACTACTTGTCACCGCAACAAATAATCCCTTCTTTGCGGAAGTGATGGCTGGC
GTGGAGCAATACTGTCAGAAAAATCAATATAATCTTATTATTGCTACAACGGGTGGAGATGCCAAACGCCTACAACAAAA
TCTGCAAACTCTAATGCACAAACAAGTGGATGGTTTGCTTTTGATGTGTGGTGATAGCCGTTTTCAGGCTGATATAGAGT
TAGCTATTTCGCTGCCACTGGTTGTGATGGACTGGTGGTTTACTGAGTTAAATGCAGATAAAATACTCGAAAATTCAGCA
CTTGGTGGCTATTTGGCGACAAAAGCATTAATTGATGCAGGACATCGTAAAATTGGCATTATTACGGGAAATCTCAAAAA
ATCTGTCGCACAAAATCGTTTGCAAGGTTATAAAAATGCGCTCTCGGAAGCAAAAATTGCGTTAAATCCTCATTGGATTG
TCGAAAGTCATTTTGACTTTGAAGGCGGTGTACTTGGCATACAATCTTTACTTACTCAATCTTCACGTCCAACAGCAGTT
TTTTGTTGTAGTGACACCATTGCTGTCGGTGCATACCAAGCTATTCAGCAACAAGGCTTACGTATTCCGCAAGATCTTTC
AATTATGGGTTATGATGACATTGAATTGGCTCGTTATCTCTCGCCTCCTCTCTCCACCATTTGCCAACCGAAAGCTAAAC
TTGGCAAACTCGCTGTTGAAACACTATTGCAACGAATTAAAAATCCTAATGAAAATTACCGCACTTTGGTGTTAGAACCG
ACTTGTGTGTTAAGAGAGTCTATTTACAGTTTCAAATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-327)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	36.585	98.795	0.361