Detailed information NTG0600109

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: K6973_RS05615
• Genome accession: NZ_CP082206
• Coordinates: 1082771..1083613 (+)
• Length: 280 a.a.
• NCBI ID: WP_218655365.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae strain DY107
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1077771..1088613

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6973_RS05590 (K6973_05590)	-	1078507..1079157 (-)	651	WP_218654524.1	hemolysin III family protein	-
K6973_RS05595 (K6973_05595)	-	1079154..1079594 (-)	441	WP_003050852.1	DUF1836 domain-containing protein	-
K6973_RS11295	-	1079945..1080334 (+)	390	WP_261987970.1	hypothetical protein	-
K6973_RS05605 (K6973_05605)	ylqF	1081056..1081904 (+)	849	WP_143978713.1	ribosome biogenesis GTPase YlqF	-
K6973_RS05610 (K6973_05610)	-	1081894..1082664 (+)	771	WP_218655366.1	ribonuclease HII	-
K6973_RS05615 (K6973_05615)	dprA	1082771..1083613 (+)	843	WP_218655365.1	DNA-processing protein DprA	Machinery gene
K6973_RS05620 (K6973_05620)	topA	1083714..1085846 (+)	2133	WP_218655364.1	type I DNA topoisomerase	-
K6973_RS05625 (K6973_05625)	-	1085922..1086806 (-)	885	WP_138125563.1	LysR family transcriptional regulator	-
K6973_RS05630 (K6973_05630)	-	1086998..1088056 (+)	1059	WP_218655363.1	PTS sugar transporter subunit IIC	-

Sequence

Protein

• Length: 280 a.a.
• Molecular weight: 31366.45 Da
• Isoelectric Point: 9.0909

>NTDB_id=600109 K6973_RS05615 WP_218655365.1 1082771..1083613(+) (dprA) [Streptococcus dysgalactiae strain DY107]
MNHFELYKLKKAGLTNKNILNILDYQKQQEKSLSLRDMAVVSCCKHPSHFIETYKQLDIQKLKMEFKQFPSISILDKHYP
MALKEIYNPPVLLFFQGNLDLLDKPKLAIVGSRRSSDTGVKSVRKILKELGNRFVIVSGLARGIDTSAHLACLKNGGQTI
AVIGTGLDRFYPKENRELQTFLGRKHLILTEYGPGEEPLSYHFPERNRIIAGLSRGILVVEAKNRSGSLITCQIGIEEGR
DIFAVPGNILDGESEGCLQLIKEGATCVTSGMDILSEYQK

Nucleotide

• Length: 843 bp

>NTDB_id=600109 K6973_RS05615 WP_218655365.1 1082771..1083613(+) (dprA) [Streptococcus dysgalactiae strain DY107]
GTGAATCATTTTGAACTTTATAAGCTAAAGAAGGCTGGACTGACTAATAAAAATATTCTCAATATTCTTGACTACCAAAA
GCAACAGGAAAAATCGTTGTCGCTTCGAGACATGGCCGTTGTTTCTTGTTGTAAGCACCCGTCTCACTTTATAGAAACCT
ATAAGCAGTTAGATATCCAAAAGTTAAAAATGGAATTTAAACAATTCCCTAGTATTTCTATCCTAGACAAACATTACCCA
ATGGCTTTGAAAGAAATATATAATCCGCCCGTCCTCTTGTTTTTTCAAGGCAATTTAGACCTTCTTGATAAACCTAAATT
AGCCATTGTTGGCTCCAGGCGCTCAAGCGATACTGGAGTAAAGTCTGTCCGTAAAATTCTTAAAGAACTCGGGAACCGTT
TTGTGATTGTTAGCGGACTCGCTCGAGGTATCGACACTAGTGCACATTTAGCCTGTCTTAAAAACGGAGGACAAACCATT
GCGGTGATAGGAACAGGATTAGACCGTTTTTACCCTAAAGAAAATCGAGAATTACAAACATTCTTAGGAAGGAAACACCT
TATCTTGACGGAATACGGTCCAGGAGAAGAACCACTATCGTATCACTTTCCGGAACGTAATCGTATTATTGCAGGGCTTA
GTCGAGGTATTCTCGTCGTTGAAGCAAAAAATCGCTCAGGTTCCTTGATTACTTGTCAAATCGGGATAGAAGAGGGGCGA
GATATTTTTGCTGTTCCAGGGAACATTTTGGACGGCGAATCCGAAGGTTGTTTACAGCTTATAAAAGAGGGAGCAACCTG
CGTCACATCAGGGATGGACATCCTTTCTGAATATCAAAAATAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-62)

• DNA recombination-mediator protein A (DNA_processg_A) (68-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	67.266	99.286	0.668
dprA/cilB/dalA	Streptococcus mitis SK321	60.215	99.643	0.6
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	60.215	99.643	0.6
dprA/cilB/dalA	Streptococcus pneumoniae D39	60.215	99.643	0.6
dprA/cilB/dalA	Streptococcus pneumoniae R6	60.215	99.643	0.6
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	60.215	99.643	0.6
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	59.857	99.643	0.596
dprA	Lactococcus lactis subsp. cremoris KW2	57.554	99.286	0.571
dprA	Legionella pneumophila strain ERS1305867	43.333	85.714	0.371
dprA	Acinetobacter baumannii D1279779	38.202	95.357	0.364
dprA	Haemophilus influenzae Rd KW20	37.828	95.357	0.361