Detailed information
Overview
| Name | pilJ | Type | Machinery gene |
| Locus tag | NC855_RS02330 | Genome accession | NZ_CP098472 |
| Coordinates | 452653..453603 (+) | Length | 316 a.a. |
| NCBI ID | WP_229433524.1 | Uniprot ID | - |
| Organism | Neisseria gonorrhoeae strain 10612 | ||
| Function | type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 447653..458603
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NC855_RS02305 (NC855_02290) | - | 448302..448811 (+) | 510 | WP_003687909.1 | isoprenylcysteine carboxyl methyltransferase family protein | - |
| NC855_RS02310 (NC855_02295) | - | 449043..449624 (-) | 582 | WP_003690895.1 | superoxide dismutase | - |
| NC855_RS02315 (NC855_02300) | dnaB | 449788..451194 (+) | 1407 | WP_003699622.1 | replicative DNA helicase | - |
| NC855_RS02320 (NC855_02305) | pilH | 451348..452013 (+) | 666 | WP_003699624.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| NC855_RS02325 (NC855_02310) | pilV | 452045..452656 (+) | 612 | WP_003699626.1 | type IV pilus modification protein PilV | Regulator |
| NC855_RS02330 (NC855_02315) | pilJ | 452653..453603 (+) | 951 | WP_229433524.1 | PilW family protein | Machinery gene |
| NC855_RS02335 (NC855_02320) | pilK | 453582..454193 (+) | 612 | WP_229433526.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| NC855_RS02340 (NC855_02325) | pilL | 454195..454668 (+) | 474 | WP_172760650.1 | PilX family type IV pilin | Machinery gene |
| NC855_RS02345 (NC855_02330) | - | 454738..455046 (-) | 309 | WP_025456177.1 | AzlD family protein | - |
| NC855_RS02350 (NC855_02335) | - | 455043..455753 (-) | 711 | Protein_463 | AzlC family ABC transporter permease | - |
| NC855_RS02355 (NC855_02340) | dut | 455919..456371 (+) | 453 | WP_003699637.1 | dUTP diphosphatase | - |
| NC855_RS02360 (NC855_02345) | dapC | 456447..457634 (+) | 1188 | WP_003699639.1 | succinyldiaminopimelate transaminase | - |
| NC855_RS02365 (NC855_02350) | yaaA | 457790..458569 (+) | 780 | WP_003699641.1 | peroxide stress protein YaaA | - |
Sequence
Protein
Download Length: 316 a.a. Molecular weight: 34816.55 Da Isoelectric Point: 9.1777
>NTDB_id=599809 NC855_RS02330 WP_229433524.1 452653..453603(+) (pilJ) [Neisseria gonorrhoeae strain 10612]
MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSVIVLIAVVSSYFTSRKLNDVANERLAEQQDLRNAATLIVRDARMAGSFG
CFNMSEHTGNDVVSNVAQKNALFYLKRNSTNSTNSTNKLIPITESPNINYQKFFQVSSALIFQYGIDDVNASAATTVVSS
CAAISKPGKQIPTLEDAKKELKIVSQDKEQNGNIARQRHVVNAYAVGRIADEQGLFRFQLNEKGEWGNPQLLAKKIKRMR
VRYIYVSDCPEDEDAGKEEQFKYTDKFDSSVTPAGVEVLLDSGGDAKIAASSDNIIYAYRINATIRGGNVCANRTL
MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSVIVLIAVVSSYFTSRKLNDVANERLAEQQDLRNAATLIVRDARMAGSFG
CFNMSEHTGNDVVSNVAQKNALFYLKRNSTNSTNSTNKLIPITESPNINYQKFFQVSSALIFQYGIDDVNASAATTVVSS
CAAISKPGKQIPTLEDAKKELKIVSQDKEQNGNIARQRHVVNAYAVGRIADEQGLFRFQLNEKGEWGNPQLLAKKIKRMR
VRYIYVSDCPEDEDAGKEEQFKYTDKFDSSVTPAGVEVLLDSGGDAKIAASSDNIIYAYRINATIRGGNVCANRTL
Nucleotide
Download Length: 951 bp
>NTDB_id=599809 NC855_RS02330 WP_229433524.1 452653..453603(+) (pilJ) [Neisseria gonorrhoeae strain 10612]
ATGAAACGTAAAATGCTAAACGTACCAAAGGGCGGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
GGGCCTGCTCAGTGTGATTGTCCTGATAGCGGTCGTATCGAGTTACTTTACATCCCGGAAATTAAATGATGTGGCAAACG
AGCGTCTTGCCGAGCAACAGGATTTGCGGAATGCGGCAACATTGATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGTTTCAATATGTCTGAGCATACCGGAAATGATGTTGTTTCCAATGTGGCGCAAAAAAACGCTCTTTTTTACTTAAAAAG
GAACAGTACAAACAGTACAAACAGTACAAATAAACTTATCCCCATAACGGAATCTCCAAATATCAATTATCAGAAATTTT
TCCAGGTTAGTAGCGCATTGATTTTTCAATACGGAATCGATGATGTTAATGCAAGCGCCGCGACTACCGTCGTCAGCAGC
TGTGCCGCAATATCGAAACCGGGCAAGCAAATCCCTACTTTAGAAGATGCAAAAAAAGAATTGAAGATTGTGAGTCAGGA
TAAGGAGCAAAATGGCAATATAGCGCGTCAAAGGCATGTGGTCAATGCCTATGCGGTCGGCAGGATTGCCGATGAGCAAG
GTTTGTTCCGCTTCCAATTGAATGAAAAGGGTGAGTGGGGTAATCCTCAGTTGCTCGCGAAAAAGATTAAACGTATGAGA
GTGCGGTATATCTATGTTTCCGATTGTCCTGAAGATGAAGATGCCGGCAAAGAGGAACAATTCAAATATACGGATAAATT
CGACAGCTCTGTTACGCCTGCCGGGGTGGAGGTTTTATTGGATAGCGGTGGTGATGCCAAGATTGCCGCTTCTTCAGATA
ATATTATTTATGCTTACCGTATCAATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACGCTTTGA
ATGAAACGTAAAATGCTAAACGTACCAAAGGGCGGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
GGGCCTGCTCAGTGTGATTGTCCTGATAGCGGTCGTATCGAGTTACTTTACATCCCGGAAATTAAATGATGTGGCAAACG
AGCGTCTTGCCGAGCAACAGGATTTGCGGAATGCGGCAACATTGATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGTTTCAATATGTCTGAGCATACCGGAAATGATGTTGTTTCCAATGTGGCGCAAAAAAACGCTCTTTTTTACTTAAAAAG
GAACAGTACAAACAGTACAAACAGTACAAATAAACTTATCCCCATAACGGAATCTCCAAATATCAATTATCAGAAATTTT
TCCAGGTTAGTAGCGCATTGATTTTTCAATACGGAATCGATGATGTTAATGCAAGCGCCGCGACTACCGTCGTCAGCAGC
TGTGCCGCAATATCGAAACCGGGCAAGCAAATCCCTACTTTAGAAGATGCAAAAAAAGAATTGAAGATTGTGAGTCAGGA
TAAGGAGCAAAATGGCAATATAGCGCGTCAAAGGCATGTGGTCAATGCCTATGCGGTCGGCAGGATTGCCGATGAGCAAG
GTTTGTTCCGCTTCCAATTGAATGAAAAGGGTGAGTGGGGTAATCCTCAGTTGCTCGCGAAAAAGATTAAACGTATGAGA
GTGCGGTATATCTATGTTTCCGATTGTCCTGAAGATGAAGATGCCGGCAAAGAGGAACAATTCAAATATACGGATAAATT
CGACAGCTCTGTTACGCCTGCCGGGGTGGAGGTTTTATTGGATAGCGGTGGTGATGCCAAGATTGCCGCTTCTTCAGATA
ATATTATTTATGCTTACCGTATCAATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACGCTTTGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilJ | Neisseria gonorrhoeae MS11 |
92.722 |
100 |
0.927 |