Detailed information NTG0059814

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: K6J64_RS07600
• Genome accession: NZ_AP018775
• Coordinates: 1542247..1543587 (-)
• Length: 446 a.a.
• NCBI ID: WP_014550847.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain CHBN-III-4 isolate 12H35
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1537247..1548587

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6J64_RS07580 (CHBNIII4_14400)	purU	1537397..1538233 (+)	837	WP_005656925.1	formyltetrahydrofolate deformylase	-
K6J64_RS07585 (CHBNIII4_14410)	aroA	1538233..1539531 (+)	1299	WP_048946987.1	3-phosphoshikimate 1-carboxyvinyltransferase	-
K6J64_RS07590 (CHBNIII4_14420)	dcm	1539785..1541008 (+)	1224	WP_038439946.1	DNA (cytosine-5-)-methyltransferase	-
K6J64_RS07595 (CHBNIII4_14430)	-	1541069..1542160 (+)	1092	WP_230306253.1	hypothetical protein	-
K6J64_RS07600 (CHBNIII4_14440)	rarA	1542247..1543587 (-)	1341	WP_014550847.1	replication-associated recombination protein A	Machinery gene
K6J64_RS07605 (CHBNIII4_14450)	lolA	1543648..1544265 (-)	618	WP_014550848.1	outer membrane lipoprotein chaperone LolA	-
K6J64_RS07610 (CHBNIII4_14460)	-	1544283..1547039 (-)	2757	WP_014550849.1	DNA translocase FtsK	-
K6J64_RS07615 (CHBNIII4_14470)	lrp	1547041..1547520 (-)	480	WP_005653255.1	leucine-responsive transcriptional regulator Lrp	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 50233.10 Da
• Isoelectric Point: 6.3316

>NTDB_id=59814 K6J64_RS07600 WP_014550847.1 1542247..1543587(-) (rarA) [Haemophilus influenzae strain CHBN-III-4 isolate 12H35]
MSNLNFDFAENDFRPLAAKMRPTSLEQYFGQSHLIGEGKPLRKAIQAGHIHSMILWGPPGTGKTTLAEIIAQRINAEVER
ISAVTSGIKEIREAIERAKQNRLADRKTILFVDEVHRFNKSQQDAFLPHIEDGTVIFIGATTENPSFELNNALLSRARVY
VLKSLTTAEIEQVLQQAVEDPERGLGKERLILEENLLQVLAEYVNGDARLALNCLELMVDMADETENGKKIDRTLLKEVL
GERQARFDKQGDRFYDLISALHKSVRGSAPDAALYWYARILTAGGDPLYVVRRLLAIASEDVGNADPRAMQVALAAWDCF
TRVGAYEGERAIAQAIIYLAVAPKSNAVYTAFNTAKQQAKDLPDYDVPPHLRNAPTNLMKELGYGAEYRYAHDEPNAYAA
GENYFPPELKDTQYYFPTNRGMEIQIKEKLERLREQDKSAVKKRYK

Nucleotide

• Length: 1341 bp

>NTDB_id=59814 K6J64_RS07600 WP_014550847.1 1542247..1543587(-) (rarA) [Haemophilus influenzae strain CHBN-III-4 isolate 12H35]
ATGTCTAACCTCAATTTTGATTTTGCCGAAAATGATTTTCGCCCACTGGCGGCCAAGATGCGTCCAACGAGTCTAGAACA
ATATTTTGGGCAAAGCCATTTAATTGGCGAGGGCAAGCCACTGCGGAAAGCTATCCAAGCTGGCCATATTCATTCAATGA
TTTTGTGGGGCCCACCAGGTACGGGGAAAACAACCCTTGCAGAAATCATAGCACAACGTATTAATGCGGAAGTAGAGCGA
ATTTCTGCGGTGACGAGTGGTATCAAAGAAATTCGTGAAGCGATTGAGCGTGCAAAACAAAATCGTCTTGCAGATCGTAA
AACTATCTTATTTGTGGATGAAGTCCATCGTTTTAATAAAAGCCAGCAAGATGCATTTTTACCGCACATTGAAGACGGAA
CCGTTATTTTTATTGGGGCGACAACAGAAAATCCCTCTTTTGAGCTAAATAATGCGTTGCTTTCTCGTGCCCGAGTGTAT
GTGCTGAAATCACTCACAACGGCTGAAATTGAACAAGTTTTGCAGCAAGCTGTAGAAGATCCTGAACGTGGATTGGGTAA
AGAGCGGTTAATTTTAGAAGAGAATTTACTGCAAGTGCTTGCCGAATATGTTAATGGGGATGCACGATTAGCCTTGAATT
GCCTCGAATTAATGGTGGATATGGCAGATGAAACGGAAAATGGAAAGAAAATTGACCGCACTTTATTAAAAGAAGTCTTA
GGCGAACGTCAAGCGAGATTTGATAAACAAGGTGATCGTTTCTATGATTTAATTTCTGCGCTACATAAATCTGTTCGCGG
TTCTGCTCCAGATGCTGCGCTGTATTGGTATGCACGAATTTTGACAGCGGGTGGAGACCCTTTATATGTCGTGCGCCGAT
TACTTGCCATAGCTTCAGAAGATGTGGGAAATGCAGATCCTCGTGCTATGCAAGTCGCATTGGCTGCTTGGGATTGCTTT
ACTCGAGTCGGGGCTTATGAAGGAGAGCGAGCCATCGCCCAAGCCATTATTTATCTTGCGGTAGCGCCAAAAAGTAATGC
AGTTTATACCGCATTTAACACTGCGAAACAGCAAGCGAAAGATTTACCCGATTACGATGTTCCACCACATTTACGCAATG
CGCCGACTAATTTAATGAAAGAGCTTGGCTATGGGGCTGAATATCGTTATGCCCACGATGAACCTAACGCTTATGCGGCA
GGCGAAAATTATTTCCCACCTGAATTAAAAGACACTCAATATTATTTTCCGACAAATAGAGGTATGGAAATTCAGATTAA
GGAAAAACTAGAACGGTTACGTGAGCAAGATAAAAGTGCGGTGAAAAAACGGTATAAATAA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (53-159)

• AAA C-terminal domain (AAA_assoc_2) (188-266)

• MgsA AAA+ ATPase C terminal (MgsA_C) (267-433)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	39.007	94.843	0.37