Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilE   Type   Machinery gene
Locus tag   BJAB0715_RS17600 Genome accession   NC_021733
Coordinates   3655496..3655921 (-) Length   141 a.a.
NCBI ID   WP_000788337.1    Uniprot ID   A0A009SG52
Organism   Acinetobacter baumannii BJAB0715     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3650496..3660921
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BJAB0715_RS17570 (BJAB0715_03515) - 3651026..3652060 (+) 1035 WP_001189446.1 lipase secretion chaperone -
  BJAB0715_RS17575 (BJAB0715_03516) - 3652175..3653116 (+) 942 WP_085916958.1 triacylglycerol lipase -
  BJAB0715_RS17580 (BJAB0715_03517) rplS 3653168..3653536 (-) 369 WP_000014562.1 50S ribosomal protein L19 -
  BJAB0715_RS17585 (BJAB0715_03518) trmD 3653744..3654484 (-) 741 WP_000464598.1 tRNA (guanosine(37)-N1)-methyltransferase TrmD -
  BJAB0715_RS17590 (BJAB0715_03519) rimM 3654530..3655078 (-) 549 WP_020753489.1 ribosome maturation factor RimM -
  BJAB0715_RS17595 (BJAB0715_03520) rpsP 3655098..3655349 (-) 252 WP_000260334.1 30S ribosomal protein S16 -
  BJAB0715_RS17600 (BJAB0715_03521) pilE 3655496..3655921 (-) 426 WP_000788337.1 type IV pilin protein Machinery gene
  BJAB0715_RS17605 (BJAB0715_03522) pilY2 3655918..3656400 (-) 483 WP_020753490.1 type IV pilin protein Machinery gene
  BJAB0715_RS17610 (BJAB0715_03523) pilY1 3656413..3660267 (-) 3855 WP_020753491.1 PilC/PilY family type IV pilus protein Machinery gene

Sequence

Protein


Download         Length: 141 a.a.        Molecular weight: 15163.36 Da        Isoelectric Point: 7.8144

>NTDB_id=59775 BJAB0715_RS17600 WP_000788337.1 3655496..3655921(-) (pilE) [Acinetobacter baumannii BJAB0715]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE

Nucleotide


Download         Length: 426 bp        

>NTDB_id=59775 BJAB0715_RS17600 WP_000788337.1 3655496..3655921(-) (pilE) [Acinetobacter baumannii BJAB0715]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTTGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCGAGTTGGACCGAGTAA

Domains

Predicted by InterproScan.

Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS)

(26-115)

Prokaryotic N-terminal methylation motif (N_methyl)

(2-24)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A009SG52

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilE Acinetobacter baumannii D1279779

90.78

100

0.908
  comF Acinetobacter baylyi ADP1

50

99.291

0.496

Multiple sequence alignment