Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   M9H69_RS07340 Genome accession   NZ_CP097843
Coordinates   1430302..1432038 (-) Length   578 a.a.
NCBI ID   WP_250315250.1    Uniprot ID   -
Organism   Streptococcus oralis strain HP01     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1425302..1437038
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M9H69_RS07315 (M9H69_07315) - 1425405..1426556 (-) 1152 WP_195215444.1 MFS transporter -
  M9H69_RS07320 (M9H69_07320) - 1426669..1427292 (-) 624 WP_250315248.1 Pr6Pr family membrane protein -
  M9H69_RS07325 (M9H69_07325) - 1427295..1427633 (-) 339 WP_173257664.1 zinc ribbon domain-containing protein YjdM -
  M9H69_RS07330 (M9H69_07330) - 1427844..1428362 (-) 519 WP_084872675.1 Dps family protein -
  M9H69_RS07335 (M9H69_07335) rcrQ 1428512..1430293 (-) 1782 WP_250315249.1 ABC transporter ATP-binding protein Regulator
  M9H69_RS07340 (M9H69_07340) rcrP 1430302..1432038 (-) 1737 WP_250315250.1 ABC transporter ATP-binding protein Regulator
  M9H69_RS07345 (M9H69_07345) tpiA 1432218..1432976 (-) 759 WP_000087900.1 triose-phosphate isomerase -
  M9H69_RS07350 (M9H69_07350) - 1433073..1433750 (-) 678 WP_250315251.1 DnaD domain-containing protein -
  M9H69_RS07355 (M9H69_07355) metA 1433759..1434703 (-) 945 WP_250315252.1 homoserine O-succinyltransferase -
  M9H69_RS07360 (M9H69_07360) - 1434890..1435402 (-) 513 WP_084940090.1 adenine phosphoribosyltransferase -

Sequence

Protein


Download         Length: 578 a.a.        Molecular weight: 65020.32 Da        Isoelectric Point: 6.0918

>NTDB_id=596626 M9H69_RS07340 WP_250315250.1 1430302..1432038(-) (rcrP) [Streptococcus oralis strain HP01]
MLYIWSYLKKYPKWLFLDFFGAVFFVIVNLGLPTVLARMIDEGVNKGNEQQLYVWAAIMLVIILCGTLGRIVLAYAASKL
TTNMVKDMRDDLYAKLQEYSHHEYEQIGVSSLVTRITSDAFVLMQFAEQTLKLGVITPMMMLSSILMIFLTSPSLAWIVA
FAVPFLAVVVIYVAVKTRPLSEKQQATLDKINQYVRENLMGLRVIRAFAREEFQEERFAGQNAVYTANSNRLFKLTGLTE
PLFVQIIIAMIVAIVWFALDPIKQGSLQIGDLVAFIEYSFHALLSFLFLSNLFTMYPRTAVSSERLKEVMEMPISIDPNE
GGVRETETHGYLEFENVTFAYPGETENPVLHNISFSAKPGETIAFIGSTGSGKSSLVQLIPRFYDVTLGKIKVDGVDVRD
YRLKSLRQKIGFIPQKALLFTGTIAENIRYGKEDASHKDLHQAADVAQAKDFIESREEGFATHLAEGGSNLSGGQKQRLS
IARAVIKNPDIYIFDDSFSALDYRTDAILRRRLKEVTQNATVLIVAQRVGTIMDADQIIVLDKGEIVGRGRHEELMETNA
IYREIAESQLKNASLTEE

Nucleotide


Download         Length: 1737 bp        

>NTDB_id=596626 M9H69_RS07340 WP_250315250.1 1430302..1432038(-) (rcrP) [Streptococcus oralis strain HP01]
ATGCTCTATATTTGGTCTTATTTGAAAAAATATCCCAAGTGGTTATTCTTGGATTTCTTTGGAGCGGTTTTCTTTGTGAT
TGTCAATCTTGGACTGCCAACTGTTCTGGCTCGGATGATTGATGAAGGTGTGAATAAAGGGAATGAACAGCAATTGTATG
TTTGGGCTGCAATTATGCTGGTGATTATCCTATGTGGAACCTTGGGGCGTATAGTCTTAGCCTACGCTGCTAGTAAGCTG
ACGACCAATATGGTCAAGGATATGAGGGATGATCTCTATGCCAAATTACAAGAGTATTCTCATCATGAATATGAACAGAT
TGGAGTGTCTTCACTGGTTACTCGCATTACCAGTGATGCCTTTGTTCTCATGCAGTTTGCAGAACAGACCTTAAAACTGG
GTGTCATCACCCCCATGATGATGCTGTCTAGTATCTTAATGATCTTCCTGACCAGTCCGTCATTAGCCTGGATAGTGGCC
TTTGCAGTACCTTTCTTAGCCGTGGTGGTCATTTATGTAGCGGTCAAGACTCGACCATTATCAGAGAAACAGCAGGCTAC
CTTAGATAAGATAAACCAATATGTCAGGGAAAATCTAATGGGACTCCGTGTCATTCGTGCCTTTGCCCGTGAGGAGTTTC
AAGAGGAACGCTTTGCAGGACAAAATGCAGTCTATACAGCTAATTCCAATCGTCTGTTTAAACTAACCGGTTTGACGGAA
CCCTTGTTTGTTCAGATTATCATTGCCATGATTGTAGCTATTGTCTGGTTTGCTCTGGATCCTATAAAACAAGGAAGCTT
GCAAATTGGGGACCTAGTAGCCTTTATCGAATATAGTTTCCACGCCCTCTTGTCCTTCCTTTTCCTATCCAATCTCTTCA
CCATGTATCCTCGTACAGCGGTTTCGAGTGAACGCTTGAAAGAGGTTATGGAGATGCCGATTTCTATTGATCCAAATGAA
GGAGGAGTCAGAGAGACAGAAACTCACGGATATTTGGAATTTGAAAATGTCACATTTGCCTATCCTGGTGAGACGGAAAA
TCCTGTTTTGCACAATATTTCTTTCAGTGCTAAACCAGGTGAAACCATTGCTTTTATCGGATCGACCGGATCTGGAAAAT
CCTCTCTTGTGCAATTGATTCCTCGTTTTTACGATGTCACGCTTGGGAAAATCAAGGTTGATGGTGTCGATGTGAGGGAT
TACCGCCTCAAGTCTCTTCGTCAAAAGATTGGTTTTATCCCGCAGAAGGCTTTACTCTTTACAGGAACTATCGCTGAAAA
TATCCGCTATGGGAAGGAAGATGCTAGTCACAAAGACCTACATCAGGCAGCGGATGTGGCGCAAGCCAAAGATTTTATCG
AAAGCCGAGAAGAAGGCTTTGCGACCCATCTAGCCGAAGGTGGAAGCAACCTTTCTGGAGGACAGAAACAACGTCTCTCA
ATTGCCCGAGCTGTTATAAAGAATCCTGATATCTATATTTTTGACGATTCTTTCTCAGCCTTGGATTATCGTACGGATGC
CATTTTGCGCCGTCGTCTCAAGGAAGTAACACAGAATGCAACGGTTTTAATTGTTGCTCAACGTGTCGGAACCATCATGG
ATGCGGACCAGATCATCGTTCTGGATAAGGGTGAAATCGTGGGTCGTGGTCGACATGAAGAATTGATGGAGACCAATGCC
ATCTATCGTGAGATTGCTGAGTCGCAGTTGAAAAATGCATCTCTAACAGAAGAATAG

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(350-497)

ABC transporter transmembrane region (ABC_membrane)

(16-279)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

39.434

91.696

0.362