Detailed information NTG0596517

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: K4756_RS13405
• Genome accession: NZ_CP081458
• Coordinates: 2585512..2587908 (-)
• Length: 798 a.a.
• NCBI ID: WP_014477509.1
• Uniprot ID: A0A8E0VTN8
• Organism: Bacillus subtilis subsp. subtilis strain ps4060
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2580512..2592908

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K4756_RS13370 (K4756_13300)	glnQ	2581586..2582314 (+)	729	WP_015384232.1	amino acid ABC transporter ATP-binding protein	-
K4756_RS13375 (K4756_13305)	glnH	2582336..2583157 (+)	822	WP_015384233.1	glutamine ABC transporter substrate-binding protein GlnH	-
K4756_RS13380 (K4756_13310)	glnM	2583218..2583868 (+)	651	WP_015483500.1	amino acid ABC transporter permease	-
K4756_RS13385 (K4756_13315)	glnP	2583885..2584541 (+)	657	WP_003229784.1	amino acid ABC transporter permease	-
K4756_RS13390 (K4756_13320)	yrzQ	2584576..2584707 (-)	132	WP_003229780.1	YrzQ family protein	-
K4756_RS13395 (K4756_13325)	-	2584729..2584920 (-)	192	WP_003225893.1	hypothetical protein	-
K4756_RS13400 (K4756_13330)	-	2584932..2585456 (-)	525	WP_080030684.1	hypothetical protein	-
K4756_RS13405 (K4756_13335)	recD2	2585512..2587908 (-)	2397	WP_014477509.1	ATP-dependent RecD-like DNA helicase	Machinery gene
K4756_RS13410 (K4756_13340)	yrrB	2587933..2588553 (-)	621	WP_206697897.1	tetratricopeptide repeat protein	-
K4756_RS13415 (K4756_13345)	mnmA	2588639..2589754 (-)	1116	WP_015483502.1	tRNA 2-thiouridine(34) synthase MnmA	-
K4756_RS13420 (K4756_13350)	iscSA	2589782..2590924 (-)	1143	WP_015384237.1	cysteine desulfurase family protein	-
K4756_RS13425 (K4756_13355)	cymR	2590943..2591359 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
K4756_RS13430 (K4756_13360)	rarA	2591562..2592827 (+)	1266	WP_015483504.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 798 a.a.
• Molecular weight: 89182.75 Da
• Isoelectric Point: 5.0708

>NTDB_id=596517 K4756_RS13405 WP_014477509.1 2585512..2587908(-) (recD2) [Bacillus subtilis subsp. subtilis strain ps4060]
MQQHPDQLKLEEEPYLKGTVNTVIYHNDTNLYTVLKVKVTETSEAIEDKAVSVTGYFPALQEEETYTFYGKIVTHPKFGL
QFQAEHFKKEIPTTKEGIIQYLSSDLFEGIGKKTAEEIVKKLGDSAINKILADASVLYDVPRLSKKKADTLAGALQRHQG
LEQIMISLNQFGFGPQLSMKIYQAYESETLEKIQENPYQLVKDVEGIGFGKADELGSRMGLSGNHPERVKAAILYTLETT
CLSEGHTYIETEQLIIDTQSLLNQSAREGQRITEMDAANAIIALGENKDIVIEDGRCYFPSLFYAEQNVAKRVKHIASQT
EYENQFPESEFLLALGELEERMNVQYAPSQKEAIQKALSSPMLLLTGGPGTGKTTVIRGIVELYGELHGVSLDPSAYKKD
EAFPIVLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTHTEDQPIEGKLLIIDEASMLDIWLANHLFKAIPDHIQI
IIVGDEDQLPSVGPGQVLRDLLASQVIPTVRLTDIYRQAEGSSIVELAHQMKNGLLPNNLTAPTKDRSFIRCGGSQIKEV
VEKVVANALKKGYTAKDIQVLAPMYRGKAGINELNVMLQDILNPPKEKRRELKFGDVVYRTGDKILQLVNQPENNVFNGD
IGEITSIFYAKENTEKEDMAVVSFDGNEMTFTKKDFNQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAIT
RAKKFLILCGEEEALEWGVKNNDATVRQTSLKNRLSVQVEEMDAELEALQKELPFSVHDANIGMEGITPFDFMKEEQQ

Nucleotide

• Length: 2397 bp

>NTDB_id=596517 K4756_RS13405 WP_014477509.1 2585512..2587908(-) (recD2) [Bacillus subtilis subsp. subtilis strain ps4060]
GTGCAGCAGCATCCGGATCAGCTTAAACTGGAGGAAGAGCCCTATTTAAAAGGGACAGTCAACACAGTCATCTATCATAA
TGACACCAATTTATATACGGTTCTGAAAGTGAAAGTCACAGAGACCTCCGAAGCCATTGAAGATAAAGCCGTATCCGTGA
CGGGCTACTTCCCTGCGCTTCAAGAAGAAGAGACCTACACGTTTTACGGAAAGATCGTAACCCATCCAAAATTCGGGCTC
CAATTTCAGGCGGAGCATTTCAAAAAAGAGATACCGACGACTAAGGAAGGCATCATTCAATATTTATCGAGTGATTTATT
CGAGGGAATCGGCAAAAAAACTGCTGAAGAAATTGTGAAAAAGCTGGGCGACAGCGCCATTAATAAAATATTGGCTGACG
CTTCAGTGCTTTATGATGTTCCCAGACTCTCAAAAAAGAAAGCCGACACGCTGGCTGGCGCATTGCAGCGGCATCAGGGA
CTGGAGCAAATCATGATTTCCTTGAATCAGTTTGGTTTTGGCCCGCAGCTGTCTATGAAAATCTATCAAGCCTATGAATC
CGAGACGCTTGAAAAGATTCAGGAAAATCCTTATCAGCTTGTGAAGGATGTAGAAGGCATCGGGTTTGGGAAAGCGGATG
AGCTGGGTAGCAGAATGGGTCTTTCGGGTAATCATCCTGAGCGGGTAAAAGCTGCTATTTTGTACACGCTTGAAACGACT
TGTCTGTCAGAGGGGCACACGTACATAGAAACGGAACAGCTGATCATTGACACCCAATCTCTGTTAAACCAGTCAGCAAG
GGAAGGGCAGCGCATCACAGAAATGGATGCCGCTAACGCGATTATTGCCCTTGGAGAAAATAAAGACATTGTCATAGAAG
ATGGCCGCTGTTATTTTCCATCGCTGTTTTACGCAGAACAAAACGTTGCAAAGCGTGTGAAACATATCGCTAGCCAAACC
GAATATGAGAACCAGTTTCCCGAATCAGAGTTTTTGCTCGCGTTGGGAGAACTGGAAGAACGGATGAACGTTCAGTATGC
CCCCAGCCAGAAGGAAGCGATTCAAAAAGCCCTTTCCTCGCCGATGCTTCTTTTAACAGGCGGTCCGGGAACAGGGAAAA
CGACGGTAATCAGAGGGATTGTCGAGCTCTATGGAGAGCTTCACGGTGTGTCACTAGACCCGTCAGCTTATAAAAAGGAT
GAAGCTTTTCCGATTGTTTTGGCCGCTCCGACAGGGAGAGCAGCAAAACGGATGAGTGAATCAACGGGACTCCCTGCAGT
CACGATACACAGGCTGCTTGGCTGGAACGGCGCTGAAGGCTTTACTCATACAGAGGATCAGCCGATCGAAGGGAAGCTGT
TAATTATCGATGAAGCTAGTATGCTTGATATATGGCTGGCGAACCATTTGTTCAAGGCGATCCCTGATCATATACAAATC
ATCATTGTCGGAGACGAAGACCAGCTGCCTTCCGTCGGTCCGGGACAAGTGCTCAGAGACCTGCTGGCATCCCAGGTGAT
TCCGACTGTGAGACTGACAGACATCTATCGTCAGGCGGAGGGGTCATCAATCGTCGAGCTTGCCCACCAGATGAAAAATG
GATTGCTGCCGAACAATTTGACTGCCCCGACAAAGGACCGTTCCTTTATTCGCTGCGGAGGCTCGCAAATTAAAGAAGTT
GTTGAGAAGGTTGTCGCCAATGCATTGAAAAAAGGCTATACGGCAAAGGACATTCAGGTCCTCGCTCCGATGTACAGAGG
AAAAGCCGGCATCAATGAATTGAATGTGATGCTGCAGGACATTTTAAATCCTCCTAAAGAAAAACGGAGAGAATTGAAGT
TCGGGGATGTTGTCTACAGAACCGGAGATAAAATTTTGCAGCTTGTCAATCAGCCGGAAAACAATGTGTTCAACGGAGAT
ATTGGCGAAATCACGTCGATATTTTATGCAAAGGAAAATACAGAAAAAGAAGACATGGCCGTCGTTTCTTTTGACGGCAA
TGAAATGACATTTACGAAAAAAGATTTTAATCAATTTACCCATGCGTATTGCTGTTCTATTCATAAATCGCAGGGAAGTG
AATTTCCGATTGTGGTTTTGCCTGTTGTGAAAGGCTATTATAGAATGCTCAGAAGAAACCTTCTTTATACCGCGATTACA
AGAGCGAAGAAATTTCTCATTTTATGCGGGGAAGAGGAGGCGCTGGAGTGGGGCGTGAAAAATAATGATGCAACTGTCAG
ACAGACCTCCTTGAAAAACAGGCTGTCCGTACAGGTTGAGGAAATGGATGCCGAGCTTGAAGCTTTGCAAAAAGAGCTCC
CGTTCAGCGTACACGACGCCAACATTGGCATGGAAGGCATTACACCATTCGATTTTATGAAAGAAGAACAGCAATAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (594-662)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-248)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (681-729)

• AAA domain (AAA_30) (346-553)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	99.875	100	0.999