Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   M8286_RS02485 Genome accession   NZ_CP097577
Coordinates   491729..492463 (+) Length   244 a.a.
NCBI ID   WP_002943067.1    Uniprot ID   A0A0H3MU26
Organism   Streptococcus suis strain 3112     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 486729..497463
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M8286_RS02460 (M8286_02470) - 487240..487548 (-) 309 WP_002938710.1 DUF1827 family protein -
  M8286_RS02465 (M8286_02475) - 487603..488064 (-) 462 WP_275601375.1 NUDIX hydrolase -
  M8286_RS02470 (M8286_02480) clpE 488250..490469 (-) 2220 WP_275601376.1 ATP-dependent Clp protease ATP-binding subunit Regulator
  M8286_RS02475 (M8286_02485) - 490692..490922 (+) 231 WP_002938704.1 DUF1797 family protein -
  M8286_RS02480 (M8286_02490) - 491047..491736 (+) 690 WP_002938702.1 amino acid ABC transporter permease -
  M8286_RS02485 (M8286_02495) amiE 491729..492463 (+) 735 WP_002943067.1 amino acid ABC transporter ATP-binding protein Regulator
  M8286_RS02490 (M8286_02500) - 492697..493545 (+) 849 WP_275601377.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -
  M8286_RS02495 (M8286_02505) - 494974..495273 (+) 300 WP_275601378.1 DNA repair protein -
  M8286_RS02500 (M8286_02510) lepB 495263..495864 (+) 602 Protein_442 signal peptidase I -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 26881.11 Da        Isoelectric Point: 4.7252

>NTDB_id=595699 M8286_RS02485 WP_002943067.1 491729..492463(+) (amiE) [Streptococcus suis strain 3112]
MSNAIISIKDLHKYFGKNEVLKGIDLDIQQGQVVVIIGPSGSGKSTFLRTMNLLEVPTKGTVTFEGVDITDKSNDIFKMR
EKMGMVFQQFNLFPNMTVLDNITLSPIKTKGIAKDEAEKKAKELLEKVGLPDKANAYPQSLSGGQQQRIAIARGLAMDPD
VLLFDEPTSALDPEMVGEVLAVMQDLAKSGMTMVIVTHEMGFAREVADRVIFMDGGVIVEDGTPEEVFEHTKEERTKDFL
SKVL

Nucleotide


Download         Length: 735 bp        

>NTDB_id=595699 M8286_RS02485 WP_002943067.1 491729..492463(+) (amiE) [Streptococcus suis strain 3112]
ATGTCTAATGCAATTATTTCTATCAAGGATTTACATAAGTACTTCGGAAAGAATGAGGTTCTAAAAGGAATTGATTTAGA
TATTCAACAAGGTCAGGTAGTCGTTATTATCGGTCCATCAGGGTCAGGGAAATCGACTTTCTTACGTACAATGAACCTCT
TAGAAGTACCGACCAAGGGAACTGTTACATTTGAAGGTGTTGATATTACTGACAAGTCAAATGATATTTTCAAGATGCGT
GAAAAGATGGGAATGGTTTTTCAACAGTTCAATCTTTTTCCGAATATGACGGTATTGGATAATATTACTTTATCACCTAT
TAAGACAAAGGGAATTGCAAAGGATGAGGCTGAGAAGAAGGCTAAGGAATTACTTGAAAAGGTAGGATTGCCAGATAAGG
CGAATGCCTATCCACAAAGTCTTTCAGGTGGTCAGCAACAGCGGATTGCTATTGCACGTGGTCTGGCCATGGACCCAGAT
GTCCTACTTTTTGATGAACCGACCTCTGCACTAGACCCTGAAATGGTTGGTGAAGTTCTTGCTGTTATGCAGGATTTGGC
TAAGTCAGGGATGACCATGGTTATCGTGACTCATGAGATGGGATTTGCGCGTGAGGTAGCTGACAGGGTTATCTTTATGG
ATGGTGGTGTCATCGTGGAGGATGGAACGCCTGAAGAAGTCTTTGAACATACCAAGGAAGAACGGACTAAGGATTTCTTG
TCTAAGGTCTTGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(21-169)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3MU26

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

34.496

100

0.365
  amiE Streptococcus thermophilus LMG 18311

34.496

100

0.365
  amiE Streptococcus thermophilus LMD-9

34.496

100

0.365