Detailed information NTG0059562

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: K6J66_RS08235
• Genome accession: NZ_AP018771
• Coordinates: 1631076..1632416 (-)
• Length: 446 a.a.
• NCBI ID: WP_005687702.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain CHBN-II-8 isolate 10H27
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1626076..1637416

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6J66_RS08215 (CHBNII8_15680)	purU	1626225..1627061 (+)	837	WP_038439945.1	formyltetrahydrofolate deformylase	-
K6J66_RS08220 (CHBNII8_15690)	aroA	1627061..1628359 (+)	1299	WP_005691273.1	3-phosphoshikimate 1-carboxyvinyltransferase	-
K6J66_RS08225 (CHBNII8_15700)	dcm	1628613..1629836 (+)	1224	WP_038439946.1	DNA (cytosine-5-)-methyltransferase	-
K6J66_RS08230 (CHBNII8_15710)	-	1629846..1630988 (+)	1143	WP_038439947.1	hypothetical protein	-
K6J66_RS08235 (CHBNII8_15720)	rarA	1631076..1632416 (-)	1341	WP_005687702.1	replication-associated recombination protein A	Machinery gene
K6J66_RS08240 (CHBNII8_15730)	lolA	1632477..1633094 (-)	618	WP_005687700.1	outer membrane lipoprotein chaperone LolA	-
K6J66_RS08245 (CHBNII8_15740)	-	1633112..1635841 (-)	2730	WP_038439949.1	DNA translocase FtsK	-
K6J66_RS08250 (CHBNII8_15750)	lrp	1635843..1636322 (-)	480	WP_005664572.1	leucine-responsive transcriptional regulator Lrp	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 50265.16 Da
• Isoelectric Point: 6.3312

>NTDB_id=59562 K6J66_RS08235 WP_005687702.1 1631076..1632416(-) (rarA) [Haemophilus influenzae strain CHBN-II-8 isolate 10H27]
MSNLNFDFVENDFRPLAAKMRPTSLEQYFGQSHLIGEGKPLRKAIQAGHIHSMILWGPPGTGKTTLAEIIAQRINAEVER
ISAVTSGIKEIREAIDRAKQNRLADRKTILFVDEVHRFNKSQQDAFLPHIEDGSVIFIGATTENPSFELNNALLSRARVY
VLKSLTTAEIEQVLQQAVEDPERGLGKERLILEENLLQVLAEYVNGDARLALNCLELMVDMADEMENGKKIDRTLLKEVL
GERQARFDKQGDRFYDLISALHKSVRGSAPDAALYWYARILTAGGDPLYVARRLLAIASEDVGNADPRAMQVALAAWDCF
TRVGAYEGERAIAQAIIYLAVAPKSNAVYTAFNTAKQQAKDLPDYDVPPHLRNAPTNLMKELGYGAEYRYAHDEPNAYAA
GENYFPPELKDTQYYFPTNRGMEIQIKEKLERLREQDKSTVKKRYK

Nucleotide

• Length: 1341 bp

>NTDB_id=59562 K6J66_RS08235 WP_005687702.1 1631076..1632416(-) (rarA) [Haemophilus influenzae strain CHBN-II-8 isolate 10H27]
ATGTCTAACCTCAATTTTGATTTTGTCGAAAATGATTTTCGCCCACTGGCGGCCAAGATGCGTCCAACGAGTCTAGAACA
ATATTTTGGGCAAAGCCATTTAATTGGCGAGGGCAAGCCACTGCGAAAAGCTATCCAAGCTGGCCATATTCATTCTATGA
TTTTGTGGGGCCCGCCAGGTACGGGGAAAACAACCCTTGCAGAAATCATAGCACAACGTATTAATGCAGAAGTAGAGCGA
ATTTCTGCGGTGACGAGTGGTATCAAAGAAATTCGTGAAGCGATTGATCGTGCAAAACAAAATCGTCTTGCGGATCGTAA
AACTATCTTATTTGTGGATGAAGTCCATCGTTTTAATAAAAGCCAGCAAGATGCATTTTTACCGCACATTGAAGACGGAA
GCGTTATTTTTATTGGGGCGACAACAGAAAATCCCTCTTTTGAGCTAAATAATGCGTTGCTTTCTCGTGCCCGAGTGTAT
GTGCTGAAATCACTCACAACGGCTGAAATTGAACAAGTTTTGCAGCAAGCTGTAGAAGATCCTGAACGAGGATTGGGTAA
AGAGCGGTTAATTTTAGAAGAGAATTTACTGCAAGTGCTTGCCGAATATGTTAATGGGGATGCACGATTAGCCTTGAATT
GCCTCGAATTAATGGTGGATATGGCAGATGAAATGGAAAATGGAAAGAAAATTGACCGCACTTTATTAAAAGAAGTCTTA
GGCGAACGTCAAGCGAGATTTGATAAACAAGGTGATCGTTTCTATGATTTAATTTCTGCGCTACATAAATCTGTTCGAGG
TTCTGCTCCAGACGCTGCACTGTATTGGTATGCAAGAATTTTAACGGCAGGTGGCGATCCTTTATATGTCGCGCGCCGAT
TACTTGCCATTGCTTCAGAAGATGTGGGAAATGCAGATCCTCGTGCTATGCAAGTTGCATTGGCTGCTTGGGATTGCTTT
ACTCGAGTGGGGGCTTATGAAGGAGAGAGAGCCATCGCCCAAGCCATTATATATCTCGCAGTAGCGCCAAAAAGTAATGC
GGTTTATACTGCATTTAACACAGCAAAACAGCAAGCGAAAGATTTGCCCGATTACGATGTTCCACCACATTTACGCAATG
CGCCAACTAATTTAATGAAAGAGCTTGGCTATGGGGCTGAATATCGTTATGCTCACGATGAACCTAACGCTTATGCGGCA
GGCGAAAATTATTTCCCACCTGAATTAAAAGATACTCAATATTATTTTCCAACGAATAGAGGTATGGAAATTCAGATTAA
GGAAAAACTAGAACGATTACGTGAGCAAGATAAAAGTACGGTGAAAAAACGGTATAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (188-266)

• MgsA AAA+ ATPase C terminal (MgsA_C) (267-433)

• ATPase family associated with various cellular activities (AAA) (AAA) (53-159)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	39.243	94.843	0.372