Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | HLV54_RS07865 | Genome accession | NZ_CP080770 |
| Coordinates | 1631838..1632137 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain HL23187 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1626838..1637137
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HLV54_RS07840 (HLV54_001568) | gcvPA | 1628050..1629396 (-) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| HLV54_RS07845 (HLV54_001569) | gcvT | 1629416..1630507 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| HLV54_RS07850 (HLV54_001570) | - | 1630666..1631190 (-) | 525 | WP_001015116.1 | shikimate kinase | - |
| HLV54_RS07855 (HLV54_001571) | - | 1631180..1631326 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| HLV54_RS07860 (HLV54_001572) | comGF | 1631423..1631920 (-) | 498 | WP_001838632.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| HLV54_RS07865 (HLV54_001573) | comGE | 1631838..1632137 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| HLV54_RS07870 (HLV54_001574) | comGD | 1632124..1632570 (-) | 447 | WP_001796473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| HLV54_RS07875 (HLV54_001575) | comGC | 1632548..1632859 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| HLV54_RS07880 (HLV54_001576) | comGB | 1632873..1633943 (-) | 1071 | WP_000776407.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| HLV54_RS07885 (HLV54_001577) | comGA | 1633915..1634889 (-) | 975 | WP_000697218.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| HLV54_RS07890 (HLV54_001578) | - | 1634941..1635564 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| HLV54_RS07895 (HLV54_001579) | - | 1635561..1635890 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| HLV54_RS07900 (HLV54_001580) | - | 1635890..1636876 (-) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| HLV54_RS07905 (HLV54_001581) | - | 1636873..1637076 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=594865 HLV54_RS07865 WP_000844413.1 1631838..1632137(-) (comGE) [Staphylococcus aureus strain HL23187]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=594865 HLV54_RS07865 WP_000844413.1 1631838..1632137(-) (comGE) [Staphylococcus aureus strain HL23187]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAGCTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAGCTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |