Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | PSYCG_RS01490 | Genome accession | NC_021661 |
| Coordinates | 350485..351537 (-) | Length | 350 a.a. |
| NCBI ID | WP_020442648.1 | Uniprot ID | A0A9E8X5L1 |
| Organism | Psychrobacter sp. G | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 345485..356537
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PSYCG_RS01465 (PSYCG_01675) | - | 346358..347500 (+) | 1143 | WP_020442644.1 | hypothetical protein | - |
| PSYCG_RS01470 (PSYCG_01680) | - | 347488..347892 (+) | 405 | WP_020442645.1 | RnfH family protein | - |
| PSYCG_RS01475 (PSYCG_01685) | - | 347918..348334 (-) | 417 | WP_051130937.1 | outer membrane protein assembly factor BamE | - |
| PSYCG_RS01480 (PSYCG_01690) | fur | 348659..349093 (+) | 435 | WP_011512663.1 | ferric iron uptake transcriptional regulator | - |
| PSYCG_RS01485 (PSYCG_01695) | pilU | 349205..350326 (-) | 1122 | WP_020442647.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| PSYCG_RS01490 (PSYCG_01700) | pilT | 350485..351537 (-) | 1053 | WP_020442648.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| PSYCG_RS01495 (PSYCG_01705) | - | 351853..352611 (+) | 759 | WP_020442649.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| PSYCG_RS01500 (PSYCG_01710) | - | 352829..354103 (-) | 1275 | WP_020442650.1 | hemolysin family protein | - |
| PSYCG_RS01505 (PSYCG_01715) | - | 354347..356050 (-) | 1704 | WP_020442651.1 | NAD+ synthase | - |
Sequence
Protein
Download Length: 350 a.a. Molecular weight: 39119.98 Da Isoelectric Point: 6.6713
>NTDB_id=59433 PSYCG_RS01490 WP_020442648.1 350485..351537(-) (pilT) [Psychrobacter sp. G]
MAEQNLSIEDLLRFTVKHKASDLHISAGMPAMIRVDGEMTRINMPEMSHKVVHQLIYDIMNDRQRADFEEFFETDFSFEI
PNLARFRVNAFNQNRGAGAVFRTIPSKVLTMEDLGMGEVFKRVSDFKRGVVLVTGPTGSGKSTTLAAMIDYINETRKEHI
LTIEDPIEFVHESKKSLINQREVHRDTLGFEPALRSALREDPDVILVGELRDLETIRLALTAAETGHLVFGTLHTSSAAK
TIDRVIDVFPAAEKDMIRAMLSESLQAVISQTLLRRQTGGRIAAHEIMLGTPAIRNLIRENKIAQMYSSIQTGAGDGMIT
LDQTLKNLVARGTISKDVARPYAKQPEAFL
MAEQNLSIEDLLRFTVKHKASDLHISAGMPAMIRVDGEMTRINMPEMSHKVVHQLIYDIMNDRQRADFEEFFETDFSFEI
PNLARFRVNAFNQNRGAGAVFRTIPSKVLTMEDLGMGEVFKRVSDFKRGVVLVTGPTGSGKSTTLAAMIDYINETRKEHI
LTIEDPIEFVHESKKSLINQREVHRDTLGFEPALRSALREDPDVILVGELRDLETIRLALTAAETGHLVFGTLHTSSAAK
TIDRVIDVFPAAEKDMIRAMLSESLQAVISQTLLRRQTGGRIAAHEIMLGTPAIRNLIRENKIAQMYSSIQTGAGDGMIT
LDQTLKNLVARGTISKDVARPYAKQPEAFL
Nucleotide
Download Length: 1053 bp
>NTDB_id=59433 PSYCG_RS01490 WP_020442648.1 350485..351537(-) (pilT) [Psychrobacter sp. G]
ATGGCTGAACAAAATTTAAGCATTGAAGACTTGCTGCGTTTTACTGTCAAGCATAAGGCTTCAGATTTACATATTTCAGC
CGGTATGCCTGCGATGATTCGAGTTGATGGTGAGATGACTCGGATTAATATGCCAGAGATGAGCCATAAGGTAGTTCATC
AGCTCATTTATGACATCATGAATGATAGACAACGTGCCGACTTTGAAGAGTTTTTTGAAACGGATTTTTCTTTTGAGATT
CCAAATCTAGCCCGTTTTCGCGTAAACGCATTTAATCAAAATCGCGGTGCAGGCGCCGTCTTTCGTACGATTCCCTCCAA
AGTTCTAACGATGGAAGATCTAGGTATGGGCGAAGTGTTTAAGCGTGTTTCAGACTTTAAACGTGGCGTGGTGTTGGTCA
CTGGTCCAACCGGCTCAGGTAAGTCGACCACGCTAGCTGCCATGATTGATTATATCAATGAAACCCGTAAAGAGCATATT
TTGACTATCGAAGACCCAATTGAATTTGTTCATGAGTCCAAAAAGAGTTTGATTAACCAGCGTGAAGTCCATCGCGATAC
CTTGGGGTTTGAGCCAGCATTGCGCTCAGCGTTACGTGAAGATCCGGACGTTATTCTGGTTGGTGAGCTACGAGATCTTG
AGACCATACGCTTAGCGCTCACTGCCGCTGAAACCGGTCACTTAGTTTTCGGCACTTTGCACACCAGTTCCGCTGCCAAA
ACCATTGACCGTGTTATTGACGTCTTCCCTGCTGCTGAAAAAGACATGATTCGAGCGATGCTATCAGAGTCACTACAAGC
CGTTATCTCGCAAACATTGTTACGTCGTCAAACAGGCGGGCGAATTGCCGCCCATGAGATTATGTTAGGTACGCCCGCTA
TTCGTAACTTAATACGAGAAAATAAAATCGCTCAAATGTACTCTTCTATCCAAACTGGTGCTGGTGATGGCATGATTACT
CTTGATCAAACTCTTAAAAATCTTGTAGCGAGAGGCACAATTAGTAAAGACGTTGCACGACCTTACGCTAAACAGCCTGA
AGCATTCTTATAA
ATGGCTGAACAAAATTTAAGCATTGAAGACTTGCTGCGTTTTACTGTCAAGCATAAGGCTTCAGATTTACATATTTCAGC
CGGTATGCCTGCGATGATTCGAGTTGATGGTGAGATGACTCGGATTAATATGCCAGAGATGAGCCATAAGGTAGTTCATC
AGCTCATTTATGACATCATGAATGATAGACAACGTGCCGACTTTGAAGAGTTTTTTGAAACGGATTTTTCTTTTGAGATT
CCAAATCTAGCCCGTTTTCGCGTAAACGCATTTAATCAAAATCGCGGTGCAGGCGCCGTCTTTCGTACGATTCCCTCCAA
AGTTCTAACGATGGAAGATCTAGGTATGGGCGAAGTGTTTAAGCGTGTTTCAGACTTTAAACGTGGCGTGGTGTTGGTCA
CTGGTCCAACCGGCTCAGGTAAGTCGACCACGCTAGCTGCCATGATTGATTATATCAATGAAACCCGTAAAGAGCATATT
TTGACTATCGAAGACCCAATTGAATTTGTTCATGAGTCCAAAAAGAGTTTGATTAACCAGCGTGAAGTCCATCGCGATAC
CTTGGGGTTTGAGCCAGCATTGCGCTCAGCGTTACGTGAAGATCCGGACGTTATTCTGGTTGGTGAGCTACGAGATCTTG
AGACCATACGCTTAGCGCTCACTGCCGCTGAAACCGGTCACTTAGTTTTCGGCACTTTGCACACCAGTTCCGCTGCCAAA
ACCATTGACCGTGTTATTGACGTCTTCCCTGCTGCTGAAAAAGACATGATTCGAGCGATGCTATCAGAGTCACTACAAGC
CGTTATCTCGCAAACATTGTTACGTCGTCAAACAGGCGGGCGAATTGCCGCCCATGAGATTATGTTAGGTACGCCCGCTA
TTCGTAACTTAATACGAGAAAATAAAATCGCTCAAATGTACTCTTCTATCCAAACTGGTGCTGGTGATGGCATGATTACT
CTTGATCAAACTCTTAAAAATCTTGTAGCGAGAGGCACAATTAGTAAAGACGTTGCACGACCTTACGCTAAACAGCCTGA
AGCATTCTTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Acinetobacter baumannii strain A118 |
79.42 |
98.571 |
0.783 |
| pilT | Acinetobacter baumannii D1279779 |
79.42 |
98.571 |
0.783 |
| pilT | Acinetobacter nosocomialis M2 |
79.13 |
98.571 |
0.78 |
| pilT | Pseudomonas stutzeri DSM 10701 |
77.907 |
98.286 |
0.766 |
| pilT | Pseudomonas aeruginosa PAK |
77.907 |
98.286 |
0.766 |
| pilT | Acinetobacter baylyi ADP1 |
76.163 |
98.286 |
0.749 |
| pilT | Legionella pneumophila strain Lp02 |
72.093 |
98.286 |
0.709 |
| pilT | Legionella pneumophila strain ERS1305867 |
72.093 |
98.286 |
0.709 |
| pilT | Neisseria meningitidis 8013 |
64.928 |
98.571 |
0.64 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
67.781 |
94 |
0.637 |
| pilT | Vibrio cholerae strain A1552 |
67.781 |
94 |
0.637 |
| pilT | Neisseria gonorrhoeae MS11 |
64.348 |
98.571 |
0.634 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
51.445 |
98.857 |
0.509 |
| pilU | Acinetobacter baylyi ADP1 |
41.399 |
98 |
0.406 |
| pilU | Vibrio cholerae strain A1552 |
43.344 |
92.286 |
0.4 |
| pilU | Pseudomonas stutzeri DSM 10701 |
41.003 |
96.857 |
0.397 |