Detailed information NTG0059374

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: K6J56_RS07565
• Genome accession: NZ_AP018768
• Coordinates: 1532888..1534228 (-)
• Length: 446 a.a.
• NCBI ID: WP_044365034.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain CHBN-II-5 isolate 13H40
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1527888..1539228

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6J56_RS07545 (CHBNII5_14370)	purU	1528038..1528874 (+)	837	WP_005661478.1	formyltetrahydrofolate deformylase	-
K6J56_RS07550 (CHBNII5_14380)	aroA	1528874..1530172 (+)	1299	WP_044365039.1	3-phosphoshikimate 1-carboxyvinyltransferase	-
K6J56_RS07555 (CHBNII5_14390)	dcm	1530426..1531649 (+)	1224	WP_044365036.1	DNA (cytosine-5-)-methyltransferase	-
K6J56_RS07560 (CHBNII5_14400)	-	1531659..1532801 (+)	1143	WP_005687705.1	hypothetical protein	-
K6J56_RS07565 (CHBNII5_14410)	rarA	1532888..1534228 (-)	1341	WP_044365034.1	replication-associated recombination protein A	Machinery gene
K6J56_RS07570 (CHBNII5_14420)	lolA	1534289..1534906 (-)	618	WP_005661471.1	outer membrane lipoprotein chaperone LolA	-
K6J56_RS07575 (CHBNII5_14430)	-	1534924..1537692 (-)	2769	WP_044365032.1	DNA translocase FtsK	-
K6J56_RS07580 (CHBNII5_14440)	lrp	1537694..1538173 (-)	480	WP_005653255.1	leucine-responsive transcriptional regulator Lrp	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 50292.19 Da
• Isoelectric Point: 6.3312

>NTDB_id=59374 K6J56_RS07565 WP_044365034.1 1532888..1534228(-) (rarA) [Haemophilus influenzae strain CHBN-II-5 isolate 13H40]
MSNLNFDFAENDFRPLAAKMRPTNLEQYFGQSHLIGEGKPLRKAIQAGHIHSMILWGPPGTGKTTLAEIIAQRINAEVER
ISAVTSGIKEIREAIDRAKQNRLADRKTILFVDEVHRFNKSQQDAFLPHIEDGTVIFIGATTENPSFELNNALLSRARVY
VLKSLTTAEIEQVLQQAVEDPERGLGKERLILEENLLQVLAEYVNGDARLALNCLELMVDMADEMENGKKIDRTLLKEVL
GERQARFDKQGDRFYDLISALHKSVRGSAPDAALYWYARILTAGGDPLYVARRLLAIASEDVGNADPRAMQVALAAWDCF
TRVGAYEGERAIAQAIIYLAVAPKSNAIYTAFNTAKQQAKDLPDYDVPPHLRNAPTNLMKELGYSAEYRYAHDEPNAYAA
GENYFPPELKDTQYYFPTNRGMEIQIKEKLERLREQDKSAVKKRYK

Nucleotide

• Length: 1341 bp

>NTDB_id=59374 K6J56_RS07565 WP_044365034.1 1532888..1534228(-) (rarA) [Haemophilus influenzae strain CHBN-II-5 isolate 13H40]
ATGTCTAACCTCAATTTTGATTTTGCCGAAAATGATTTTCGCCCACTGGCGGCCAAGATGCGTCCAACAAATCTAGAACA
ATATTTTGGGCAAAGCCATTTAATTGGCGAGGGCAAGCCACTGCGAAAAGCTATCCAAGCTGGGCATATTCATTCTATGA
TTTTGTGGGGCCCACCAGGTACGGGGAAAACAACCCTTGCAGAAATCATAGCACAACGTATTAATGCAGAAGTAGAGCGA
ATTTCTGCGGTGACGAGTGGTATCAAAGAAATTCGTGAAGCGATTGATCGTGCAAAACAAAATCGTCTTGCGGATCGTAA
AACTATCTTATTTGTGGATGAAGTCCATCGTTTTAATAAAAGCCAGCAAGATGCATTTTTACCGCACATTGAAGACGGAA
CCGTTATTTTTATTGGGGCGACAACAGAAAATCCCTCTTTTGAGCTAAATAATGCGTTGCTTTCTCGTGCCCGAGTGTAT
GTGCTGAAATCACTCACAACGGCTGAAATTGAACAAGTTTTGCAGCAAGCTGTAGAAGATCCTGAACGAGGATTGGGTAA
AGAGCGGTTAATTTTAGAAGAGAATTTACTGCAAGTGCTTGCCGAATATGTTAATGGGGATGCACGATTAGCCTTGAATT
GCCTCGAATTAATGGTGGATATGGCAGATGAAATGGAAAATGGAAAGAAAATTGACCGCACTTTATTAAAAGAAGTCTTA
GGCGAACGTCAAGCGAGATTTGATAAACAAGGTGATCGTTTCTATGATTTAATTTCTGCGCTACATAAATCTGTTCGAGG
TTCTGCTCCAGACGCTGCACTGTATTGGTATGCAAGAATTTTAACGGCAGGTGGCGATCCTTTATATGTCGCGCGCCGAT
TACTTGCCATTGCTTCAGAAGATGTGGGAAATGCAGATCCTCGTGCTATGCAAGTTGCATTGGCTGCATGGGATTGCTTT
ACTAGAGTGGGGGCTTATGAAGGGGAGCGTGCCATTGCCCAAGCCATTATTTATCTTGCGGTAGCTCCAAAAAGTAATGC
GATTTATACTGCATTTAACACTGCGAAACAGCAAGCGAAAGATTTGCCTGATTATGATGTTCCCCCACATTTACGCAATG
CGCCGACTAATTTAATGAAAGAGCTTGGCTATAGTGCTGAATATCGTTATGCCCACGATGAACCTAACGCTTATGCAGCT
GGTGAAAATTATTTCCCGCCTGAATTAAAAGACACTCAATATTATTTTCCGACGAATAGAGGTATGGAAATTCAGATTAA
GGAAAAACTAGAACGATTACGTGAGCAAGATAAAAGTGCGGTGAAAAAACGGTATAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (188-266)

• MgsA AAA+ ATPase C terminal (MgsA_C) (267-433)

• ATPase family associated with various cellular activities (AAA) (AAA) (53-159)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	39.007	94.843	0.37