Detailed information NTG0593408

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: KTJ85_RS12460
• Genome accession: NZ_CP080509
• Coordinates: 2457401..2459779 (-)
• Length: 792 a.a.
• NCBI ID: WP_115997690.1
• Uniprot ID: -
• Organism: Bacillus sp. 7D3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2452401..2464779

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KTJ85_RS12425 (KTJ85_12425)	-	2453479..2454207 (+)	729	WP_115997689.1	amino acid ABC transporter ATP-binding protein	-
KTJ85_RS12430 (KTJ85_12430)	-	2454231..2455058 (+)	828	WP_013353014.1	transporter substrate-binding domain-containing protein	-
KTJ85_RS12435 (KTJ85_12435)	-	2455116..2455766 (+)	651	WP_065981957.1	amino acid ABC transporter permease	-
KTJ85_RS12440 (KTJ85_12440)	-	2455785..2456441 (+)	657	WP_065522692.1	amino acid ABC transporter permease	-
KTJ85_RS12445 (KTJ85_12445)	-	2456475..2456606 (-)	132	WP_003152741.1	YrzQ family protein	-
KTJ85_RS12450 (KTJ85_12450)	-	2456628..2456819 (-)	192	WP_003152738.1	hypothetical protein	-
KTJ85_RS12455 (KTJ85_12455)	-	2456832..2457290 (-)	459	WP_065981959.1	hypothetical protein	-
KTJ85_RS12460 (KTJ85_12460)	recD2	2457401..2459779 (-)	2379	WP_115997690.1	ATP-dependent RecD-like DNA helicase	Machinery gene
KTJ85_RS12465 (KTJ85_12465)	-	2459798..2460418 (-)	621	WP_088030693.1	lipopolysaccharide assembly protein LapB	-
KTJ85_RS12470 (KTJ85_12470)	mnmA	2460506..2461621 (-)	1116	WP_065981961.1	tRNA 2-thiouridine(34) synthase MnmA	-
KTJ85_RS12475 (KTJ85_12475)	-	2461658..2462797 (-)	1140	WP_065981962.1	cysteine desulfurase family protein	-
KTJ85_RS12480 (KTJ85_12480)	cymR	2462816..2463232 (-)	417	WP_013353022.1	cysteine metabolism transcriptional regulator CymR	-
KTJ85_RS12485 (KTJ85_12485)	-	2463427..2464695 (+)	1269	WP_065981963.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 792 a.a.
• Molecular weight: 88274.09 Da
• Isoelectric Point: 5.0709

>NTDB_id=593408 KTJ85_RS12460 WP_115997690.1 2457401..2459779(-) (recD2) [Bacillus sp. 7D3]
MDQLKIEEQPYVKGVIHTVIYHNDTNLYTVLKVKVAETSEAIEDKVVSVTGYFPLLQEDETYTFYGKTATHPKFGLQFQA
EHFKKEIPTTKEGIIHYLSSDLFEGIGKKTAEEIVKKLGDGALNKILADASVLYDVPKMSKKKADKLAGELQRHQGLEQI
MISLNQYGFGPQLSMKIYQAYETETLEKIQENPYQLVKDVEGIGFVKADELGGKMGLSGNHPERIKAAILYTIESTCLSE
GHTYIDTKQLIINTQTLLNQSAGGGRVTEMDAAEGIIALGESKDIVIEGERCYFPSLFYAEQNVAKRVLDIAAQTEYADQ
FPESEFLLALGELEERMKVQYAPSQKDAIQKALSSPMLLLTGGPGTGKTTVIKGIVELYSELHGVSLDPGDYKKDEAFPV
LLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTYNEDQPIEGKLIIIDEASMLDIWLASHLFKALPKHIQLIVVGD
EDQLPSVGPGQVLRDLLASEVLPTVRLTDIYRQAEGSSIVELAHDMKKGLLPKGLTAPTKDRSFIRCNSAQIKEVVDQVV
SNALKKGYTSRDIQVLAPMYRGKAGINELNMLLQDIMNPPKEKRRELKFGDVVYRTGDKILQLVNQPENNVFNGDIGEIV
SIFYAKENTEKEDMVVVSFDGNEITFTKKDFSQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAITRAKKF
LILCGEEEALEWGVKNNDATVRQTSLKNRLTEQTEEMDAELAALQKELPFSVYDANIGMEGITPFDFMEEKA

Nucleotide

• Length: 2379 bp

>NTDB_id=593408 KTJ85_RS12460 WP_115997690.1 2457401..2459779(-) (recD2) [Bacillus sp. 7D3]
GTGGATCAGCTGAAAATCGAGGAACAACCGTATGTAAAAGGCGTCATTCATACGGTCATTTACCACAATGACACCAACCT
GTATACAGTGCTGAAAGTCAAGGTTGCAGAAACGTCTGAGGCGATCGAAGACAAGGTCGTATCCGTAACGGGCTACTTCC
CTCTGCTGCAAGAAGATGAGACTTACACATTTTACGGAAAAACCGCCACACATCCCAAGTTCGGCCTGCAATTCCAGGCT
GAACACTTTAAGAAAGAAATTCCGACCACAAAAGAAGGGATCATTCACTATTTATCAAGCGATCTGTTTGAAGGAATCGG
AAAAAAAACGGCGGAAGAAATCGTCAAAAAGCTCGGAGACGGCGCGCTGAATAAAATTCTGGCTGATGCGTCGGTGCTTT
ACGATGTGCCGAAAATGTCCAAAAAGAAAGCGGATAAGCTTGCCGGAGAGCTGCAGCGGCATCAGGGGCTGGAGCAGATT
ATGATTTCTCTTAACCAATACGGTTTCGGACCTCAGCTTTCCATGAAAATTTATCAGGCTTACGAAACGGAAACCCTTGA
GAAAATTCAGGAGAATCCTTATCAGCTTGTAAAGGACGTGGAAGGCATCGGCTTTGTAAAGGCCGACGAGCTGGGCGGAA
AAATGGGTCTGTCAGGAAACCATCCCGAGCGGATCAAAGCGGCTATCTTATATACGATTGAATCGACCTGCCTTTCAGAA
GGTCATACGTACATAGACACAAAGCAGCTGATTATCAATACGCAAACGCTTCTGAATCAGTCAGCTGGCGGAGGCCGCGT
CACGGAAATGGATGCGGCTGAAGGCATCATCGCCCTCGGAGAGAGTAAGGATATCGTCATAGAAGGAGAACGCTGCTATT
TTCCGTCTTTGTTTTACGCGGAACAAAATGTCGCAAAACGCGTGCTCGATATTGCGGCTCAGACGGAGTATGCCGATCAA
TTTCCTGAATCGGAATTTCTGCTTGCGCTCGGCGAACTGGAAGAACGGATGAAAGTTCAATACGCTCCGAGCCAAAAGGA
TGCTATTCAAAAAGCGCTGTCGTCGCCGATGCTTTTACTGACCGGGGGACCGGGTACGGGAAAAACGACCGTTATCAAAG
GAATCGTGGAATTATACAGTGAACTCCACGGCGTATCGCTTGATCCCGGTGATTATAAAAAAGACGAGGCGTTTCCGGTG
CTGCTTGCCGCGCCGACCGGAAGAGCCGCAAAACGGATGAGTGAATCTACGGGTCTGCCGGCTGTTACGATTCACAGGCT
GCTCGGCTGGAATGGCGCTGAAGGCTTTACCTATAATGAGGATCAGCCGATTGAAGGGAAACTGATCATTATAGACGAAG
CGAGTATGCTCGATATTTGGCTCGCCAGCCATTTGTTTAAGGCGCTCCCTAAGCACATTCAGCTCATCGTCGTCGGTGAT
GAAGACCAGCTTCCTTCCGTGGGGCCGGGGCAGGTGCTGAGAGACCTTTTGGCTTCTGAGGTGCTGCCGACCGTGCGCCT
GACAGATATTTACCGTCAGGCGGAAGGGTCATCCATCGTCGAACTTGCCCATGATATGAAAAAAGGACTGCTTCCAAAAG
GACTGACCGCGCCGACAAAGGACCGCTCGTTTATCCGCTGTAATTCTGCACAGATTAAAGAAGTCGTCGATCAAGTCGTT
TCAAACGCGTTAAAGAAGGGATATACCTCCAGAGATATTCAAGTGCTTGCGCCGATGTACAGGGGAAAAGCGGGAATTAA
CGAGCTGAATATGCTTCTTCAAGACATCATGAATCCGCCGAAAGAAAAAAGGCGGGAGCTGAAATTCGGAGATGTCGTCT
ACAGAACGGGCGATAAAATATTGCAGCTTGTCAACCAGCCGGAAAACAATGTGTTTAACGGTGATATCGGCGAAATCGTG
TCCATTTTTTATGCCAAAGAAAATACGGAAAAAGAAGACATGGTAGTCGTCTCGTTTGACGGCAATGAAATCACCTTTAC
GAAAAAGGATTTCAGCCAGTTTACCCATGCTTACTGCTGTTCCATCCATAAGTCTCAGGGAAGTGAATTTCCGATTGTCG
TCCTGCCTGTCGTCAAAGGCTACTATCGTATGCTTAGGAGAAATCTCCTTTATACCGCCATTACAAGGGCCAAGAAATTT
CTGATTCTTTGCGGAGAAGAAGAAGCGCTTGAATGGGGTGTCAAAAACAATGATGCCACCGTCAGACAGACGTCGCTTAA
AAACAGGCTCACAGAGCAGACTGAAGAGATGGATGCAGAACTGGCCGCTCTGCAAAAAGAACTGCCGTTCAGTGTATATG
ATGCGAACATCGGAATGGAAGGCATTACGCCGTTTGACTTTATGGAAGAAAAAGCGTAA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (341-548)

• Helix-hairpin-helix containing domain (HHH_RecD2) (154-244)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (589-659)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (676-724)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	88.748	99.874	0.886